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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.414740Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 105 / 3316537 93 / 2498449 44620 / 114162531 4588 / 109592465 105 / 3316537 93 / 2498449 44620 / 114162531 4588 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 4 / 57865 -- 57 / 83577 1 / 16077 4 / 57865 -- 57 / 83577
bone marrow     25 / 5047110 66 / 4978364 0 / 14774 0 / 29891 25 / 5047110 66 / 4978364
brain 10 / 506301 10 / 200215 79 / 729526 542 / 4997811 10 / 506301 10 / 200215 79 / 729526 542 / 4997811
cartilage 1 / 15965 1 / 37226 -- 247 / 778035 1 / 15965 1 / 37226 -- 247 / 778035
cerebellum     6 / 90885 74 / 1495938 0 / 90353 0 / 0 6 / 90885 74 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 3 / 26551 5 / 151167 3 / 98089 123 / 643586 3 / 26551 5 / 151167 3 / 98089 123 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 18 / 246043   -- -- 18 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 9 / 128826 1 / 46440 16 / 85898 34 / 12434232 9 / 128826 1 / 46440 16 / 85898 34 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721 1 / 45908 -- 1 / 28803 1 / 12721 1 / 45908 --
heart 1 / 76442   5 / 83063 -- 1 / 76442 0 / 1 5 / 83063 --
kidney 1 / 106627   9 / 155372 21 / 100281 1 / 106627 0 / 89898 9 / 155372 21 / 100281
limb -- -- -- -- -- -- -- --
liver   3 / 107249 1 / 66308 36 / 214987 0 / 96846 3 / 107249 1 / 66308 36 / 214987
lung 13 / 128150 17 / 170663 14 / 159917 16 / 159059 13 / 128150 17 / 170663 14 / 159917 16 / 159059
lymph node 1 / 62650   358 / 5278419 168 / 4863489 1 / 62650 0 / 27007 358 / 5278419 168 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 3 / 46553 4 / 104307 41993 / 43166038 1682 / 30312656 3 / 46553 4 / 104307 41993 / 43166038 1682 / 30312656
muscle     5 / 107836 6 / 61270 0 / 74039 0 / 27691 5 / 107836 6 / 61270
nervous 2 / 10333   -- -- 2 / 10333 0 / 8 -- --
ovary   4 / 89988 12 / 94887 19 / 179472 0 / 11462 4 / 89988 12 / 94887 19 / 179472
pancreas   14 / 74930 6 / 85728 38 / 189999 0 / 7237 14 / 74930 6 / 85728 38 / 189999
pancreatic islet 1 / 96524 2 / 30072 -- -- 1 / 96524 2 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 10 / 241088 2 / 39531 22 / 207348 -- 10 / 241088 2 / 39531 22 / 207348 --
pooled tissue 5 / 276455   -- -- 5 / 276455 0 / 0 -- --
prostate 8 / 79993 6 / 107080 24 / 266949 51 / 491794 8 / 79993 6 / 107080 24 / 266949 51 / 491794
retina   -- 34 / 820326   0 / 29438 -- 34 / 820326 0 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin     403 / 26905847 621 / 34522313 0 / 73633 0 / 125377 403 / 26905847 621 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 280 / 6230144 -- -- -- 280 / 6230144 --
stomach   4 / 65644   48 / 448716 0 / 26641 4 / 65644 0 / 124767 48 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630   -- 724 / 12372003 2 / 143630 0 / 100058 -- 724 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737   5 / 115938 11 / 124664 1 / 11737 0 / 32606 5 / 115938 11 / 124664
uncharacterized tissue 8 / 207932 11 / 479819 3 / 21833 4 / 51729 8 / 207932 11 / 479819 3 / 21833 4 / 51729
uterus   3 / 133582 1195 / 10193077 -- 0 / 38063 3 / 133582 1195 / 10193077 --
vascular   -- 91 / 13135050 -- 0 / 46250 -- 91 / 13135050 --
white blood cells -- -- 30 / 846268 -- -- -- 30 / 846268 --
whole body -- -- -- -- -- -- -- --