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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.412117Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 926 / 3316537 407 / 2498449 7290 / 114162531 4369 / 109592465 926 / 3316537 407 / 2498449 7290 / 114162531 4369 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 6 / 16077 7 / 57865 -- 10 / 83577 6 / 16077 7 / 57865 -- 10 / 83577
bone marrow 7 / 14774 54 / 29891 9 / 5047110 48 / 4978364 7 / 14774 54 / 29891 9 / 5047110 48 / 4978364
brain 137 / 506301 50 / 200215 68 / 729526 296 / 4997811 137 / 506301 50 / 200215 68 / 729526 296 / 4997811
cartilage 12 / 15965 7 / 37226 -- 99 / 778035 12 / 15965 7 / 37226 -- 99 / 778035
cerebellum 15 / 90353   1 / 90885 34 / 1495938 15 / 90353 0 / 0 1 / 90885 34 / 1495938
cerebrum 114 / 198932   -- -- 114 / 198932 0 / 3422 -- --
cervix 3 / 3888 3 / 44577 -- -- 3 / 3888 3 / 44577 -- --
colon 3 / 26551 14 / 151167   24 / 643586 3 / 26551 14 / 151167 0 / 98089 24 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 45 / 246043   -- -- 45 / 246043 0 / 38 -- --
endocrine 5 / 19564   -- -- 5 / 19564 0 / 2857 -- --
esophagus 2 / 270 1 / 17290 -- -- 2 / 270 1 / 17290 -- --
eye 32 / 128826   6 / 85898 102 / 12434232 32 / 128826 0 / 46440 6 / 85898 102 / 12434232
gastrointestinal tract 18 / 28803 1 / 12721 1 / 45908 -- 18 / 28803 1 / 12721 1 / 45908 --
heart 26 / 76442   6 / 83063 -- 26 / 76442 0 / 1 6 / 83063 --
kidney 67 / 106627 30 / 89898 5 / 155372 2 / 100281 67 / 106627 30 / 89898 5 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 9 / 96846 11 / 107249 3 / 66308 2 / 214987 9 / 96846 11 / 107249 3 / 66308 2 / 214987
lung 24 / 128150 12 / 170663 2 / 159917 5 / 159059 24 / 128150 12 / 170663 2 / 159917 5 / 159059
lymph node 1 / 62650 19 / 27007 382 / 5278419 16 / 4863489 1 / 62650 19 / 27007 382 / 5278419 16 / 4863489
lymphoreticular 1 / 17836 6 / 44303 -- -- 1 / 17836 6 / 44303 -- --
mammary gland 4 / 46553 17 / 104307 4052 / 43166038 1614 / 30312656 4 / 46553 17 / 104307 4052 / 43166038 1614 / 30312656
muscle 7 / 74039 10 / 27691 11 / 107836 7 / 61270 7 / 74039 10 / 27691 11 / 107836 7 / 61270
nervous 8 / 10333   -- -- 8 / 10333 0 / 8 -- --
ovary 2 / 11462 11 / 89988 14 / 94887 11 / 179472 2 / 11462 11 / 89988 14 / 94887 11 / 179472
pancreas   5 / 74930 1 / 85728 6 / 189999 0 / 7237 5 / 74930 1 / 85728 6 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 11 / 14891   -- -- 11 / 14891 0 / 645 -- --
pineal gland 2 / 6170 -- -- -- 2 / 6170 -- -- --
pituitary gland 5 / 13260   -- -- 5 / 13260 0 / 1358 -- --
placenta 78 / 241088   6 / 207348 -- 78 / 241088 0 / 39531 6 / 207348 --
pooled tissue 22 / 276455   -- -- 22 / 276455 0 / 0 -- --
prostate 26 / 79993 10 / 107080 7 / 266949 22 / 491794 26 / 79993 10 / 107080 7 / 266949 22 / 491794
retina 3 / 29438 -- 47 / 820326 1 / 88490 3 / 29438 -- 47 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 32 / 73633 8 / 125377 639 / 26905847 1122 / 34522313 32 / 73633 8 / 125377 639 / 26905847 1122 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 39 / 52939   -- -- 39 / 52939 0 / 5 -- --
stem cell -- -- 199 / 6230144 -- -- -- 199 / 6230144 --
stomach 7 / 26641 7 / 65644   10 / 448716 7 / 26641 7 / 65644 0 / 124767 10 / 448716
synovium   1 / 1650 -- -- 0 / 249 1 / 1650 -- --
testis 26 / 143630 14 / 100058 -- 935 / 12372003 26 / 143630 14 / 100058 -- 935 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 2 / 11737 8 / 32606 2 / 115938   2 / 11737 8 / 32606 2 / 115938 0 / 124664
uncharacterized tissue 91 / 207932 85 / 479819 6 / 21833 3 / 51729 91 / 207932 85 / 479819 6 / 21833 3 / 51729
uterus 4 / 38063 15 / 133582 733 / 10193077 -- 4 / 38063 15 / 133582 733 / 10193077 --
vascular 22 / 46250 -- 1009 / 13135050 -- 22 / 46250 -- 1009 / 13135050 --
white blood cells -- -- 81 / 846268 -- -- -- 81 / 846268 --
whole body -- -- -- -- -- -- -- --