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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.409602Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 234 / 3316537 165 / 2498449 8140 / 114162531 5108 / 109592465 234 / 3316537 165 / 2498449 8140 / 114162531 5108 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 5 / 16077 4 / 57865 --   5 / 16077 4 / 57865 -- 0 / 83577
bone marrow 8 / 14774   1 / 5047110   8 / 14774 0 / 29891 1 / 5047110 0 / 4978364
brain 20 / 506301 5 / 200215 6 / 729526 88 / 4997811 20 / 506301 5 / 200215 6 / 729526 88 / 4997811
cartilage 24 / 15965 5 / 37226 -- 20 / 778035 24 / 15965 5 / 37226 -- 20 / 778035
cerebellum       15 / 1495938 0 / 90353 0 / 0 0 / 90885 15 / 1495938
cerebrum 6 / 198932   -- -- 6 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   8 / 151167     0 / 26551 8 / 151167 0 / 98089 0 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 15 / 246043   -- -- 15 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 17 / 128826   1 / 85898 1159 / 12434232 17 / 128826 0 / 46440 1 / 85898 1159 / 12434232
gastrointestinal tract 4 / 28803     -- 4 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 19 / 106627 1 / 89898 8 / 155372   19 / 106627 1 / 89898 8 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver         0 / 96846 0 / 107249 0 / 66308 0 / 214987
lung 6 / 128150 2 / 170663 2 / 159917 4 / 159059 6 / 128150 2 / 170663 2 / 159917 4 / 159059
lymph node   1 / 27007 95 / 5278419   0 / 62650 1 / 27007 95 / 5278419 0 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 8 / 46553 9 / 104307 178 / 43166038 2081 / 30312656 8 / 46553 9 / 104307 178 / 43166038 2081 / 30312656
muscle 18 / 74039 5 / 27691   5 / 61270 18 / 74039 5 / 27691 0 / 107836 5 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 2 / 89988 4 / 94887 3 / 179472 1 / 11462 2 / 89988 4 / 94887 3 / 179472
pancreas 2 / 7237 17 / 74930   8 / 189999 2 / 7237 17 / 74930 0 / 85728 8 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 5 / 241088   1 / 207348 -- 5 / 241088 0 / 39531 1 / 207348 --
pooled tissue 17 / 276455   -- -- 17 / 276455 0 / 0 -- --
prostate 5 / 79993 1 / 107080 1 / 266949 1 / 491794 5 / 79993 1 / 107080 1 / 266949 1 / 491794
retina 2 / 29438 -- 47 / 820326 3 / 88490 2 / 29438 -- 47 / 820326 3 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 5 / 73633 1 / 125377 556 / 26905847 1621 / 34522313 5 / 73633 1 / 125377 556 / 26905847 1621 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 80 / 6230144 -- -- -- 80 / 6230144 --
stomach   9 / 65644 8 / 124767 48 / 448716 0 / 26641 9 / 65644 8 / 124767 48 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 8 / 143630 20 / 100058 -- 50 / 12372003 8 / 143630 20 / 100058 -- 50 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 7 / 115938 2 / 124664 0 / 11737 1 / 32606 7 / 115938 2 / 124664
uncharacterized tissue 17 / 207932 59 / 479819     17 / 207932 59 / 479819 0 / 21833 0 / 51729
uterus 9 / 38063 15 / 133582 210 / 10193077 -- 9 / 38063 15 / 133582 210 / 10193077 --
vascular 5 / 46250 -- 6935 / 13135050 -- 5 / 46250 -- 6935 / 13135050 --
white blood cells -- --   -- -- -- 0 / 846268 --
whole body -- -- -- -- -- -- -- --