Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.408528Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 150 / 3316537 103 / 2498449 1320 / 114162531 1682 / 109592465 150 / 3316537 103 / 2498449 1320 / 114162531 1682 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 --   0 / 16077 2 / 57865 -- 0 / 83577
bone marrow   2 / 29891 26 / 5047110 8 / 4978364 0 / 14774 2 / 29891 26 / 5047110 8 / 4978364
brain 15 / 506301 8 / 200215 3 / 729526 72 / 4997811 15 / 506301 8 / 200215 3 / 729526 72 / 4997811
cartilage   1 / 37226 -- 2 / 778035 0 / 15965 1 / 37226 -- 2 / 778035
cerebellum 2 / 90353     17 / 1495938 2 / 90353 0 / 0 0 / 90885 17 / 1495938
cerebrum 8 / 198932   -- -- 8 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   6 / 151167   1 / 643586 0 / 26551 6 / 151167 0 / 98089 1 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 10 / 246043   -- -- 10 / 246043 0 / 38 -- --
endocrine   1 / 2857 -- -- 0 / 19564 1 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 2 / 128826 1 / 46440   78 / 12434232 2 / 128826 1 / 46440 0 / 85898 78 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 4 / 106627 5 / 89898     4 / 106627 5 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846 3 / 107249     3 / 96846 3 / 107249 0 / 66308 0 / 214987
lung 1 / 128150 1 / 170663 3 / 159917 1 / 159059 1 / 128150 1 / 170663 3 / 159917 1 / 159059
lymph node 18 / 62650 1 / 27007 96 / 5278419 38 / 4863489 18 / 62650 1 / 27007 96 / 5278419 38 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 2 / 46553 8 / 104307 69 / 43166038 475 / 30312656 2 / 46553 8 / 104307 69 / 43166038 475 / 30312656
muscle 4 / 74039 1 / 27691   1 / 61270 4 / 74039 1 / 27691 0 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 1 / 11462 2 / 89988   1 / 179472 1 / 11462 2 / 89988 0 / 94887 1 / 179472
pancreas       3 / 189999 0 / 7237 0 / 74930 0 / 85728 3 / 189999
pancreatic islet 9 / 96524 1 / 30072 -- -- 9 / 96524 1 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 21 / 241088 2 / 39531 1 / 207348 -- 21 / 241088 2 / 39531 1 / 207348 --
pooled tissue 16 / 276455   -- -- 16 / 276455 0 / 0 -- --
prostate   5 / 107080   1 / 491794 0 / 79993 5 / 107080 0 / 266949 1 / 491794
retina   -- 5 / 820326   0 / 29438 -- 5 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 5 / 73633 7 / 125377 360 / 26905847 880 / 34522313 5 / 73633 7 / 125377 360 / 26905847 880 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 145 / 6230144 -- -- -- 145 / 6230144 --
stomach 1 / 26641     2 / 448716 1 / 26641 0 / 65644 0 / 124767 2 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 9 / 143630 6 / 100058 -- 98 / 12372003 9 / 143630 6 / 100058 -- 98 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   5 / 32606 1 / 115938 2 / 124664 0 / 11737 5 / 32606 1 / 115938 2 / 124664
uncharacterized tissue 14 / 207932 24 / 479819   2 / 51729 14 / 207932 24 / 479819 0 / 21833 2 / 51729
uterus 3 / 38063 8 / 133582 107 / 10193077 -- 3 / 38063 8 / 133582 107 / 10193077 --
vascular   -- 493 / 13135050 -- 0 / 46250 -- 493 / 13135050 --
white blood cells -- -- 11 / 846268 -- -- -- 11 / 846268 --
whole body -- -- -- -- -- -- -- --