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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.389137Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 137 / 3316537 94 / 2498449 3498 / 114162531 7105 / 109592465 137 / 3316537 94 / 2498449 3498 / 114162531 7105 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 8 / 16077 6 / 57865 -- 1 / 83577 8 / 16077 6 / 57865 -- 1 / 83577
bone marrow     15 / 5047110   0 / 14774 0 / 29891 15 / 5047110 0 / 4978364
brain 4 / 506301 6 / 200215 12 / 729526 219 / 4997811 4 / 506301 6 / 200215 12 / 729526 219 / 4997811
cartilage   1 / 37226 -- 17 / 778035 0 / 15965 1 / 37226 -- 17 / 778035
cerebellum       282 / 1495938 0 / 90353 0 / 0 0 / 90885 282 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 3 / 26551 10 / 151167   9 / 643586 3 / 26551 10 / 151167 0 / 98089 9 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 30 / 246043   -- -- 30 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 7 / 128826   17 / 85898 16 / 12434232 7 / 128826 0 / 46440 17 / 85898 16 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 13 / 76442   6 / 83063 -- 13 / 76442 0 / 1 6 / 83063 --
kidney 2 / 106627 5 / 89898 2 / 155372 6 / 100281 2 / 106627 5 / 89898 2 / 155372 6 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 3 / 107249   4 / 214987 1 / 96846 3 / 107249 0 / 66308 4 / 214987
lung 4 / 128150 8 / 170663 9 / 159917 6 / 159059 4 / 128150 8 / 170663 9 / 159917 6 / 159059
lymph node     122 / 5278419   0 / 62650 0 / 27007 122 / 5278419 0 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 6 / 104307 99 / 43166038 3535 / 30312656 1 / 46553 6 / 104307 99 / 43166038 3535 / 30312656
muscle 3 / 74039     1 / 61270 3 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   2 / 89988 20 / 94887 14 / 179472 0 / 11462 2 / 89988 20 / 94887 14 / 179472
pancreas   7 / 74930   14 / 189999 0 / 7237 7 / 74930 0 / 85728 14 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 27 / 241088   66 / 207348 -- 27 / 241088 0 / 39531 66 / 207348 --
pooled tissue 14 / 276455   -- -- 14 / 276455 0 / 0 -- --
prostate 1 / 79993   25 / 266949 3 / 491794 1 / 79993 0 / 107080 25 / 266949 3 / 491794
retina 1 / 29438 -- 21 / 820326   1 / 29438 -- 21 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 6 / 73633 5 / 125377 545 / 26905847 1581 / 34522313 6 / 73633 5 / 125377 545 / 26905847 1581 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 428 / 6230144 -- -- -- 428 / 6230144 --
stomach   1 / 65644 2 / 124767 21 / 448716 0 / 26641 1 / 65644 2 / 124767 21 / 448716
synovium   2 / 1650 -- -- 0 / 249 2 / 1650 -- --
testis 4 / 143630   -- 1370 / 12372003 4 / 143630 0 / 100058 -- 1370 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid     2 / 115938 2 / 124664 0 / 11737 0 / 32606 2 / 115938 2 / 124664
uncharacterized tissue 4 / 207932 21 / 479819 1 / 21833 4 / 51729 4 / 207932 21 / 479819 1 / 21833 4 / 51729
uterus   10 / 133582 428 / 10193077 -- 0 / 38063 10 / 133582 428 / 10193077 --
vascular 2 / 46250 -- 1678 / 13135050 -- 2 / 46250 -- 1678 / 13135050 --
white blood cells -- --   -- -- -- 0 / 846268 --
whole body -- -- -- -- -- -- -- --