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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.388733Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 99 / 3316537 109 / 2498449 824 / 114162531 931 / 109592465 99 / 3316537 109 / 2498449 824 / 114162531 931 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   5 / 57865 --   0 / 16077 5 / 57865 -- 0 / 83577
bone marrow 1 / 14774   1 / 5047110 13 / 4978364 1 / 14774 0 / 29891 1 / 5047110 13 / 4978364
brain 14 / 506301 3 / 200215 5 / 729526 36 / 4997811 14 / 506301 3 / 200215 5 / 729526 36 / 4997811
cartilage   4 / 37226 -- 2 / 778035 0 / 15965 4 / 37226 -- 2 / 778035
cerebellum       15 / 1495938 0 / 90353 0 / 0 0 / 90885 15 / 1495938
cerebrum 6 / 198932   -- -- 6 / 198932 0 / 3422 -- --
cervix   4 / 44577 -- -- 0 / 3888 4 / 44577 -- --
colon 2 / 26551 16 / 151167   3 / 643586 2 / 26551 16 / 151167 0 / 98089 3 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 12 / 246043   -- -- 12 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 2 / 128826 5 / 46440   120 / 12434232 2 / 128826 5 / 46440 0 / 85898 120 / 12434232
gastrointestinal tract   2 / 12721 1 / 45908 -- 0 / 28803 2 / 12721 1 / 45908 --
heart     4 / 83063 -- 0 / 76442 0 / 1 4 / 83063 --
kidney 7 / 106627 2 / 89898 3 / 155372   7 / 106627 2 / 89898 3 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 3 / 107249 3 / 66308 3 / 214987 1 / 96846 3 / 107249 3 / 66308 3 / 214987
lung 4 / 128150 3 / 170663 3 / 159917   4 / 128150 3 / 170663 3 / 159917 0 / 159059
lymph node 2 / 62650   35 / 5278419 23 / 4863489 2 / 62650 0 / 27007 35 / 5278419 23 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland   4 / 104307 79 / 43166038 249 / 30312656 0 / 46553 4 / 104307 79 / 43166038 249 / 30312656
muscle 2 / 74039 1 / 27691     2 / 74039 1 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   4 / 89988 2 / 94887 3 / 179472 0 / 11462 4 / 89988 2 / 94887 3 / 179472
pancreas         0 / 7237 0 / 74930 0 / 85728 0 / 189999
pancreatic islet 3 / 96524 4 / 30072 -- -- 3 / 96524 4 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 9 / 241088     -- 9 / 241088 0 / 39531 0 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate   2 / 107080 1 / 266949 1 / 491794 0 / 79993 2 / 107080 1 / 266949 1 / 491794
retina   -- 13 / 820326 1 / 88490 0 / 29438 -- 13 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   11 / 125377 345 / 26905847 290 / 34522313 0 / 73633 11 / 125377 345 / 26905847 290 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 50 / 6230144 -- -- -- 50 / 6230144 --
stomach 1 / 26641 3 / 65644 2 / 124767 3 / 448716 1 / 26641 3 / 65644 2 / 124767 3 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 5 / 143630 8 / 100058 -- 163 / 12372003 5 / 143630 8 / 100058 -- 163 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606   3 / 124664 0 / 11737 1 / 32606 0 / 115938 3 / 124664
uncharacterized tissue 5 / 207932 15 / 479819   3 / 51729 5 / 207932 15 / 479819 0 / 21833 3 / 51729
uterus   7 / 133582 127 / 10193077 -- 0 / 38063 7 / 133582 127 / 10193077 --
vascular 1 / 46250 -- 143 / 13135050 -- 1 / 46250 -- 143 / 13135050 --
white blood cells -- -- 7 / 846268 -- -- -- 7 / 846268 --
whole body -- -- -- -- -- -- -- --