Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.382865Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 95 / 3316537 56 / 2498449 1337 / 114162531 1075 / 109592465 95 / 3316537 56 / 2498449 1337 / 114162531 1075 / 109592465
adrenal cortex -- 3 / 9928 -- -- -- 3 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   4 / 57865 -- 2 / 83577 0 / 16077 4 / 57865 -- 2 / 83577
bone marrow 1 / 14774     2 / 4978364 1 / 14774 0 / 29891 0 / 5047110 2 / 4978364
brain 12 / 506301 2 / 200215 4 / 729526 20 / 4997811 12 / 506301 2 / 200215 4 / 729526 20 / 4997811
cartilage   1 / 37226 -- 1 / 778035 0 / 15965 1 / 37226 -- 1 / 778035
cerebellum 1 / 90353     1 / 1495938 1 / 90353 0 / 0 0 / 90885 1 / 1495938
cerebrum 8 / 198932   -- -- 8 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon 1 / 26551 2 / 151167 1 / 98089 1 / 643586 1 / 26551 2 / 151167 1 / 98089 1 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 2 / 246043   -- -- 2 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 8 / 128826   2 / 85898 10 / 12434232 8 / 128826 0 / 46440 2 / 85898 10 / 12434232
gastrointestinal tract 2 / 28803     -- 2 / 28803 0 / 12721 0 / 45908 --
heart 5 / 76442   1 / 83063 -- 5 / 76442 0 / 1 1 / 83063 --
kidney 12 / 106627 2 / 89898 1 / 155372   12 / 106627 2 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846   1 / 66308 1 / 214987 3 / 96846 0 / 107249 1 / 66308 1 / 214987
lung 2 / 128150 4 / 170663   3 / 159059 2 / 128150 4 / 170663 0 / 159917 3 / 159059
lymph node     29 / 5278419 2 / 4863489 0 / 62650 0 / 27007 29 / 5278419 2 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 3 / 46553 2 / 104307 143 / 43166038 445 / 30312656 3 / 46553 2 / 104307 143 / 43166038 445 / 30312656
muscle 1 / 74039       1 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   1 / 89988   2 / 179472 0 / 11462 1 / 89988 0 / 94887 2 / 179472
pancreas     1 / 85728 2 / 189999 0 / 7237 0 / 74930 1 / 85728 2 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 8 / 241088 2 / 39531   -- 8 / 241088 2 / 39531 0 / 207348 --
pooled tissue 10 / 276455   -- -- 10 / 276455 0 / 0 -- --
prostate       2 / 491794 0 / 79993 0 / 107080 0 / 266949 2 / 491794
retina   -- 2 / 820326   0 / 29438 -- 2 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633 3 / 125377 387 / 26905847 559 / 34522313 2 / 73633 3 / 125377 387 / 26905847 559 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 5 / 6230144 -- -- -- 5 / 6230144 --
stomach     1 / 124767 3 / 448716 0 / 26641 0 / 65644 1 / 124767 3 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 6 / 143630 2 / 100058 -- 18 / 12372003 6 / 143630 2 / 100058 -- 18 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737   1 / 115938 1 / 124664 1 / 11737 0 / 32606 1 / 115938 1 / 124664
uncharacterized tissue 3 / 207932 22 / 479819     3 / 207932 22 / 479819 0 / 21833 0 / 51729
uterus 3 / 38063 3 / 133582 528 / 10193077 -- 3 / 38063 3 / 133582 528 / 10193077 --
vascular   -- 228 / 13135050 -- 0 / 46250 -- 228 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --