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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.380403Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 157 / 3316537 114 / 2498449 1506 / 114162531 2517 / 109592465 157 / 3316537 114 / 2498449 1506 / 114162531 2517 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   5 / 57865 --   0 / 16077 5 / 57865 -- 0 / 83577
bone marrow 1 / 14774 3 / 29891 26 / 5047110 62 / 4978364 1 / 14774 3 / 29891 26 / 5047110 62 / 4978364
brain 20 / 506301 5 / 200215 16 / 729526 164 / 4997811 20 / 506301 5 / 200215 16 / 729526 164 / 4997811
cartilage 2 / 15965   -- 10 / 778035 2 / 15965 0 / 37226 -- 10 / 778035
cerebellum 5 / 90353   1 / 90885 67 / 1495938 5 / 90353 0 / 0 1 / 90885 67 / 1495938
cerebrum 10 / 198932   -- -- 10 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   5 / 151167   6 / 643586 0 / 26551 5 / 151167 0 / 98089 6 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 8 / 246043   -- -- 8 / 246043 0 / 38 -- --
endocrine   1 / 2857 -- -- 0 / 19564 1 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 8 / 128826   1 / 85898 418 / 12434232 8 / 128826 0 / 46440 1 / 85898 418 / 12434232
gastrointestinal tract 4 / 28803     -- 4 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 5 / 106627 4 / 89898 3 / 155372   5 / 106627 4 / 89898 3 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 9 / 107249 1 / 66308 3 / 214987 4 / 96846 9 / 107249 1 / 66308 3 / 214987
lung 9 / 128150 6 / 170663 2 / 159917 3 / 159059 9 / 128150 6 / 170663 2 / 159917 3 / 159059
lymph node 3 / 62650 2 / 27007 138 / 5278419 15 / 4863489 3 / 62650 2 / 27007 138 / 5278419 15 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 2 / 46553 11 / 104307 264 / 43166038 1230 / 30312656 2 / 46553 11 / 104307 264 / 43166038 1230 / 30312656
muscle 3 / 74039   1 / 107836 3 / 61270 3 / 74039 0 / 27691 1 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   9 / 89988   5 / 179472 0 / 11462 9 / 89988 0 / 94887 5 / 179472
pancreas   2 / 74930   1 / 189999 0 / 7237 2 / 74930 0 / 85728 1 / 189999
pancreatic islet 5 / 96524 4 / 30072 -- -- 5 / 96524 4 / 30072 -- --
parathyroid   8 / 20557 -- -- 0 / 24 8 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 12 / 241088   7 / 207348 -- 12 / 241088 0 / 39531 7 / 207348 --
pooled tissue 20 / 276455   -- -- 20 / 276455 0 / 0 -- --
prostate 4 / 79993 5 / 107080 3 / 266949 7 / 491794 4 / 79993 5 / 107080 3 / 266949 7 / 491794
retina 2 / 29438 -- 21 / 820326 4 / 88490 2 / 29438 -- 21 / 820326 4 / 88490
salivary gland 2 / 2490   -- -- 2 / 2490 0 / 10368 -- --
skin 2 / 73633 5 / 125377 476 / 26905847 438 / 34522313 2 / 73633 5 / 125377 476 / 26905847 438 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 47 / 6230144 -- -- -- 47 / 6230144 --
stomach   2 / 65644 1 / 124767 10 / 448716 0 / 26641 2 / 65644 1 / 124767 10 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 8 / 143630 4 / 100058 -- 69 / 12372003 8 / 143630 4 / 100058 -- 69 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 1 / 115938 1 / 124664 0 / 11737 1 / 32606 1 / 115938 1 / 124664
uncharacterized tissue 6 / 207932 15 / 479819   1 / 51729 6 / 207932 15 / 479819 0 / 21833 1 / 51729
uterus 4 / 38063 5 / 133582 283 / 10193077 -- 4 / 38063 5 / 133582 283 / 10193077 --
vascular 3 / 46250 -- 208 / 13135050 -- 3 / 46250 -- 208 / 13135050 --
white blood cells -- -- 6 / 846268 -- -- -- 6 / 846268 --
whole body -- -- -- -- -- -- -- --