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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.355950Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 47 / 3316537 39 / 2498449 4294 / 114162531 7055 / 109592465 47 / 3316537 39 / 2498449 4294 / 114162531 7055 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 -- 3 / 83577 0 / 16077 2 / 57865 -- 3 / 83577
bone marrow     117 / 5047110 149 / 4978364 0 / 14774 0 / 29891 117 / 5047110 149 / 4978364
brain 8 / 506301   27 / 729526 139 / 4997811 8 / 506301 0 / 200215 27 / 729526 139 / 4997811
cartilage     -- 12 / 778035 0 / 15965 0 / 37226 -- 12 / 778035
cerebellum 1 / 90353   2 / 90885 65 / 1495938 1 / 90353 0 / 0 2 / 90885 65 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   4 / 151167 1 / 98089 24 / 643586 0 / 26551 4 / 151167 1 / 98089 24 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 2 / 128826   2 / 85898 809 / 12434232 2 / 128826 0 / 46440 2 / 85898 809 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart 2 / 76442     -- 2 / 76442 0 / 1 0 / 83063 --
kidney     8 / 155372   0 / 106627 0 / 89898 8 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver   1 / 107249 5 / 66308 1 / 214987 0 / 96846 1 / 107249 5 / 66308 1 / 214987
lung 5 / 128150 3 / 170663 1 / 159917 3 / 159059 5 / 128150 3 / 170663 1 / 159917 3 / 159059
lymph node 1 / 62650   172 / 5278419 82 / 4863489 1 / 62650 0 / 27007 172 / 5278419 82 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 2 / 46553   544 / 43166038 3353 / 30312656 2 / 46553 0 / 104307 544 / 43166038 3353 / 30312656
muscle 1 / 74039   3 / 107836 4 / 61270 1 / 74039 0 / 27691 3 / 107836 4 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     3 / 94887 16 / 179472 0 / 11462 0 / 89988 3 / 94887 16 / 179472
pancreas   1 / 74930   6 / 189999 0 / 7237 1 / 74930 0 / 85728 6 / 189999
pancreatic islet 6 / 96524   -- -- 6 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 3 / 241088   1 / 207348 -- 3 / 241088 0 / 39531 1 / 207348 --
pooled tissue 3 / 276455   -- -- 3 / 276455 0 / 0 -- --
prostate 4 / 79993 2 / 107080 10 / 266949 49 / 491794 4 / 79993 2 / 107080 10 / 266949 49 / 491794
retina 1 / 29438 -- 33 / 820326 15 / 88490 1 / 29438 -- 33 / 820326 15 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633   1316 / 26905847 1266 / 34522313 2 / 73633 0 / 125377 1316 / 26905847 1266 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 586 / 6230144 -- -- -- 586 / 6230144 --
stomach 1 / 26641 3 / 65644 8 / 124767 22 / 448716 1 / 26641 3 / 65644 8 / 124767 22 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630 2 / 100058 -- 1033 / 12372003 2 / 143630 2 / 100058 -- 1033 / 12372003
thymus 2 / 4478   -- -- 2 / 4478 0 / 165 -- --
thyroid     4 / 115938 4 / 124664 0 / 11737 0 / 32606 4 / 115938 4 / 124664
uncharacterized tissue   16 / 479819     0 / 207932 16 / 479819 0 / 21833 0 / 51729
uterus   3 / 133582 437 / 10193077 -- 0 / 38063 3 / 133582 437 / 10193077 --
vascular   -- 936 / 13135050 -- 0 / 46250 -- 936 / 13135050 --
white blood cells -- -- 77 / 846268 -- -- -- 77 / 846268 --
whole body -- -- -- -- -- -- -- --