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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.350966Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 168 / 3316537 170 / 2498449 6389 / 114162531 15761 / 109592465 168 / 3316537 170 / 2498449 6389 / 114162531 15761 / 109592465
adrenal cortex -- 2 / 9928 -- -- -- 2 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 --   0 / 16077 2 / 57865 -- 0 / 83577
bone marrow 3 / 14774 7 / 29891 593 / 5047110 218 / 4978364 3 / 14774 7 / 29891 593 / 5047110 218 / 4978364
brain 5 / 506301 12 / 200215 7 / 729526 164 / 4997811 5 / 506301 12 / 200215 7 / 729526 164 / 4997811
cartilage   1 / 37226 -- 22 / 778035 0 / 15965 1 / 37226 -- 22 / 778035
cerebellum     1 / 90885 76 / 1495938 0 / 90353 0 / 0 1 / 90885 76 / 1495938
cerebrum 1 / 198932   -- -- 1 / 198932 0 / 3422 -- --
cervix   4 / 44577 -- -- 0 / 3888 4 / 44577 -- --
colon   8 / 151167   121 / 643586 0 / 26551 8 / 151167 0 / 98089 121 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 14 / 246043   -- -- 14 / 246043 0 / 38 -- --
endocrine   1 / 2857 -- -- 0 / 19564 1 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 1 / 128826 2 / 46440 3 / 85898 5937 / 12434232 1 / 128826 2 / 46440 3 / 85898 5937 / 12434232
gastrointestinal tract 2 / 28803 3 / 12721   -- 2 / 28803 3 / 12721 0 / 45908 --
heart 4 / 76442     -- 4 / 76442 0 / 1 0 / 83063 --
kidney   2 / 89898 24 / 155372 4 / 100281 0 / 106627 2 / 89898 24 / 155372 4 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846 5 / 107249   15 / 214987 3 / 96846 5 / 107249 0 / 66308 15 / 214987
lung 11 / 128150 4 / 170663 1 / 159917 1 / 159059 11 / 128150 4 / 170663 1 / 159917 1 / 159059
lymph node 9 / 62650 4 / 27007 223 / 5278419 454 / 4863489 9 / 62650 4 / 27007 223 / 5278419 454 / 4863489
lymphoreticular   2 / 44303 -- -- 0 / 17836 2 / 44303 -- --
mammary gland 1 / 46553 22 / 104307 367 / 43166038 3083 / 30312656 1 / 46553 22 / 104307 367 / 43166038 3083 / 30312656
muscle 3 / 74039     3 / 61270 3 / 74039 0 / 27691 0 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   15 / 89988 18 / 94887 20 / 179472 0 / 11462 15 / 89988 18 / 94887 20 / 179472
pancreas   2 / 74930 3 / 85728 8 / 189999 0 / 7237 2 / 74930 3 / 85728 8 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta   1 / 39531 1 / 207348 -- 0 / 241088 1 / 39531 1 / 207348 --
pooled tissue 62 / 276455   -- -- 62 / 276455 0 / 0 -- --
prostate   6 / 107080 15 / 266949 25 / 491794 0 / 79993 6 / 107080 15 / 266949 25 / 491794
retina   -- 4 / 820326 35 / 88490 0 / 29438 -- 4 / 820326 35 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633 15 / 125377 798 / 26905847 3081 / 34522313 2 / 73633 15 / 125377 798 / 26905847 3081 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 2356 / 6230144 -- -- -- 2356 / 6230144 --
stomach 1 / 26641 2 / 65644   18 / 448716 1 / 26641 2 / 65644 0 / 124767 18 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 23 / 143630 16 / 100058 -- 2460 / 12372003 23 / 143630 16 / 100058 -- 2460 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     11 / 115938 8 / 124664 0 / 11737 0 / 32606 11 / 115938 8 / 124664
uncharacterized tissue 19 / 207932 24 / 479819 9 / 21833 8 / 51729 19 / 207932 24 / 479819 9 / 21833 8 / 51729
uterus 2 / 38063 8 / 133582 24 / 10193077 -- 2 / 38063 8 / 133582 24 / 10193077 --
vascular   -- 1928 / 13135050 -- 0 / 46250 -- 1928 / 13135050 --
white blood cells -- -- 3 / 846268 -- -- -- 3 / 846268 --
whole body -- -- -- -- -- -- -- --