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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.343627Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 96 / 3316537 60 / 2498449 4535 / 114162531 8432 / 109592465 96 / 3316537 60 / 2498449 4535 / 114162531 8432 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow   4 / 29891 46 / 5047110 30 / 4978364 0 / 14774 4 / 29891 46 / 5047110 30 / 4978364
brain 16 / 506301 1 / 200215 27 / 729526 386 / 4997811 16 / 506301 1 / 200215 27 / 729526 386 / 4997811
cartilage   1 / 37226 -- 32 / 778035 0 / 15965 1 / 37226 -- 32 / 778035
cerebellum 3 / 90353   2 / 90885 69 / 1495938 3 / 90353 0 / 0 2 / 90885 69 / 1495938
cerebrum 6 / 198932   -- -- 6 / 198932 0 / 3422 -- --
cervix   2 / 44577 -- -- 0 / 3888 2 / 44577 -- --
colon   6 / 151167   10 / 643586 0 / 26551 6 / 151167 0 / 98089 10 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 4 / 246043   -- -- 4 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye     1 / 85898 1372 / 12434232 0 / 128826 0 / 46440 1 / 85898 1372 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 5 / 76442   7 / 83063 -- 5 / 76442 0 / 1 7 / 83063 --
kidney 4 / 106627 2 / 89898 13 / 155372   4 / 106627 2 / 89898 13 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver     3 / 66308 2 / 214987 0 / 96846 0 / 107249 3 / 66308 2 / 214987
lung   6 / 170663 9 / 159917 6 / 159059 0 / 128150 6 / 170663 9 / 159917 6 / 159059
lymph node 8 / 62650 2 / 27007 245 / 5278419 307 / 4863489 8 / 62650 2 / 27007 245 / 5278419 307 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland   1 / 104307 120 / 43166038 2483 / 30312656 0 / 46553 1 / 104307 120 / 43166038 2483 / 30312656
muscle 1 / 74039   3 / 107836 9 / 61270 1 / 74039 0 / 27691 3 / 107836 9 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   2 / 89988 5 / 94887 5 / 179472 0 / 11462 2 / 89988 5 / 94887 5 / 179472
pancreas     2 / 85728 1 / 189999 0 / 7237 0 / 74930 2 / 85728 1 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 13 / 241088   3 / 207348 -- 13 / 241088 0 / 39531 3 / 207348 --
pooled tissue 8 / 276455   -- -- 8 / 276455 0 / 0 -- --
prostate 3 / 79993 2 / 107080 8 / 266949 12 / 491794 3 / 79993 2 / 107080 8 / 266949 12 / 491794
retina   -- 45 / 820326 11 / 88490 0 / 29438 -- 45 / 820326 11 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 1 / 125377 2106 / 26905847 2800 / 34522313 4 / 73633 1 / 125377 2106 / 26905847 2800 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 865 / 6230144 -- -- -- 865 / 6230144 --
stomach 1 / 26641 1 / 65644 2 / 124767 22 / 448716 1 / 26641 1 / 65644 2 / 124767 22 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 5 / 143630 8 / 100058 -- 862 / 12372003 5 / 143630 8 / 100058 -- 862 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 2 / 11737   5 / 115938 10 / 124664 2 / 11737 0 / 32606 5 / 115938 10 / 124664
uncharacterized tissue 4 / 207932 16 / 479819 4 / 21833 3 / 51729 4 / 207932 16 / 479819 4 / 21833 3 / 51729
uterus   2 / 133582 484 / 10193077 -- 0 / 38063 2 / 133582 484 / 10193077 --
vascular 4 / 46250 -- 484 / 13135050 -- 4 / 46250 -- 484 / 13135050 --
white blood cells -- -- 46 / 846268 -- -- -- 46 / 846268 --
whole body -- -- -- -- -- -- -- --