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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.343244Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 159 / 3316537 122 / 2498449 3138 / 114162531 1196 / 109592465 159 / 3316537 122 / 2498449 3138 / 114162531 1196 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 3 / 57865 -- 1 / 83577 1 / 16077 3 / 57865 -- 1 / 83577
bone marrow   2 / 29891 64 / 5047110 257 / 4978364 0 / 14774 2 / 29891 64 / 5047110 257 / 4978364
brain 24 / 506301 3 / 200215 32 / 729526 19 / 4997811 24 / 506301 3 / 200215 32 / 729526 19 / 4997811
cartilage     -- 5 / 778035 0 / 15965 0 / 37226 -- 5 / 778035
cerebellum 1 / 90353   4 / 90885 7 / 1495938 1 / 90353 0 / 0 4 / 90885 7 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix   8 / 44577 -- -- 0 / 3888 8 / 44577 -- --
colon   17 / 151167 5 / 98089 17 / 643586 0 / 26551 17 / 151167 5 / 98089 17 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 14 / 246043   -- -- 14 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 5 / 128826   3 / 85898 31 / 12434232 5 / 128826 0 / 46440 3 / 85898 31 / 12434232
gastrointestinal tract 2 / 28803     -- 2 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 3 / 106627 6 / 89898 3 / 155372   3 / 106627 6 / 89898 3 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 6 / 96846 2 / 107249   2 / 214987 6 / 96846 2 / 107249 0 / 66308 2 / 214987
lung 2 / 128150 11 / 170663 2 / 159917 4 / 159059 2 / 128150 11 / 170663 2 / 159917 4 / 159059
lymph node 8 / 62650 3 / 27007 121 / 5278419 27 / 4863489 8 / 62650 3 / 27007 121 / 5278419 27 / 4863489
lymphoreticular 3 / 17836 2 / 44303 -- -- 3 / 17836 2 / 44303 -- --
mammary gland 7 / 46553 3 / 104307 1235 / 43166038 323 / 30312656 7 / 46553 3 / 104307 1235 / 43166038 323 / 30312656
muscle 2 / 74039       2 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 4 / 89988   6 / 179472 1 / 11462 4 / 89988 0 / 94887 6 / 179472
pancreas   1 / 74930 1 / 85728 6 / 189999 0 / 7237 1 / 74930 1 / 85728 6 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260 1 / 1358 -- -- 1 / 13260 1 / 1358 -- --
placenta 23 / 241088 2 / 39531 1 / 207348 -- 23 / 241088 2 / 39531 1 / 207348 --
pooled tissue 19 / 276455   -- -- 19 / 276455 0 / 0 -- --
prostate 12 / 79993 9 / 107080 5 / 266949 17 / 491794 12 / 79993 9 / 107080 5 / 266949 17 / 491794
retina   -- 10 / 820326   0 / 29438 -- 10 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633   767 / 26905847 383 / 34522313 4 / 73633 0 / 125377 767 / 26905847 383 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 29 / 6230144 -- -- -- 29 / 6230144 --
stomach   3 / 65644   11 / 448716 0 / 26641 3 / 65644 0 / 124767 11 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630   -- 80 / 12372003 2 / 143630 0 / 100058 -- 80 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     1 / 115938   0 / 11737 0 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 7 / 207932 31 / 479819     7 / 207932 31 / 479819 0 / 21833 0 / 51729
uterus   11 / 133582 529 / 10193077 -- 0 / 38063 11 / 133582 529 / 10193077 --
vascular 1 / 46250 -- 276 / 13135050 -- 1 / 46250 -- 276 / 13135050 --
white blood cells -- -- 50 / 846268 -- -- -- 50 / 846268 --
whole body -- -- -- -- -- -- -- --