Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.337040Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 40 / 3316537 27 / 2498449 25175 / 114162531 10180 / 109592465 40 / 3316537 27 / 2498449 25175 / 114162531 10180 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     -- 88 / 83577 0 / 16077 0 / 57865 -- 88 / 83577
bone marrow     20 / 5047110 41 / 4978364 0 / 14774 0 / 29891 20 / 5047110 41 / 4978364
brain 16 / 506301 1 / 200215 193 / 729526 1144 / 4997811 16 / 506301 1 / 200215 193 / 729526 1144 / 4997811
cartilage   2 / 37226 -- 259 / 778035 0 / 15965 2 / 37226 -- 259 / 778035
cerebellum     16 / 90885 719 / 1495938 0 / 90353 0 / 0 16 / 90885 719 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon     6 / 98089 246 / 643586 0 / 26551 0 / 151167 6 / 98089 246 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 5 / 246043   -- -- 5 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 1 / 128826   66 / 85898 891 / 12434232 1 / 128826 0 / 46440 66 / 85898 891 / 12434232
gastrointestinal tract 1 / 28803   1 / 45908 -- 1 / 28803 0 / 12721 1 / 45908 --
heart     13 / 83063 -- 0 / 76442 0 / 1 13 / 83063 --
kidney   1 / 89898 41 / 155372 37 / 100281 0 / 106627 1 / 89898 41 / 155372 37 / 100281
limb -- -- -- -- -- -- -- --
liver   2 / 107249 12 / 66308 17 / 214987 0 / 96846 2 / 107249 12 / 66308 17 / 214987
lung     23 / 159917 20 / 159059 0 / 128150 0 / 170663 23 / 159917 20 / 159059
lymph node     106 / 5278419 50 / 4863489 0 / 62650 0 / 27007 106 / 5278419 50 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland   1 / 104307 20690 / 43166038 2371 / 30312656 0 / 46553 1 / 104307 20690 / 43166038 2371 / 30312656
muscle 1 / 74039   2 / 107836 6 / 61270 1 / 74039 0 / 27691 2 / 107836 6 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 2 / 11462   23 / 94887 45 / 179472 2 / 11462 0 / 89988 23 / 94887 45 / 179472
pancreas     10 / 85728 59 / 189999 0 / 7237 0 / 74930 10 / 85728 59 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 2 / 241088   16 / 207348 -- 2 / 241088 0 / 39531 16 / 207348 --
pooled tissue     -- -- 0 / 276455 0 / 0 -- --
prostate     72 / 266949 183 / 491794 0 / 79993 0 / 107080 72 / 266949 183 / 491794
retina   -- 297 / 820326 16 / 88490 0 / 29438 -- 297 / 820326 16 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633   416 / 26905847 1813 / 34522313 3 / 73633 0 / 125377 416 / 26905847 1813 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 575 / 6230144 -- -- -- 575 / 6230144 --
stomach     4 / 124767 87 / 448716 0 / 26641 0 / 65644 4 / 124767 87 / 448716
synovium 1 / 249   -- -- 1 / 249 0 / 1650 -- --
testis   12 / 100058 -- 2068 / 12372003 0 / 143630 12 / 100058 -- 2068 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737   11 / 115938 14 / 124664 1 / 11737 0 / 32606 11 / 115938 14 / 124664
uncharacterized tissue   8 / 479819 7 / 21833 6 / 51729 0 / 207932 8 / 479819 7 / 21833 6 / 51729
uterus     1693 / 10193077 -- 0 / 38063 0 / 133582 1693 / 10193077 --
vascular 2 / 46250 -- 838 / 13135050 -- 2 / 46250 -- 838 / 13135050 --
white blood cells -- -- 24 / 846268 -- -- -- 24 / 846268 --
whole body -- -- -- -- -- -- -- --