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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.333786Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 414 / 3316537 346 / 2498449 10687 / 114162531 25973 / 109592465 414 / 3316537 346 / 2498449 10687 / 114162531 25973 / 109592465
adrenal cortex -- 6 / 9928 -- -- -- 6 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 3 / 57865 --   2 / 16077 3 / 57865 -- 0 / 83577
bone marrow 2 / 14774 2 / 29891 213 / 5047110 260 / 4978364 2 / 14774 2 / 29891 213 / 5047110 260 / 4978364
brain 20 / 506301 25 / 200215 72 / 729526 987 / 4997811 20 / 506301 25 / 200215 72 / 729526 987 / 4997811
cartilage 1 / 15965 8 / 37226 -- 35 / 778035 1 / 15965 8 / 37226 -- 35 / 778035
cerebellum 6 / 90353   2 / 90885 267 / 1495938 6 / 90353 0 / 0 2 / 90885 267 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix 1 / 3888 2 / 44577 -- -- 1 / 3888 2 / 44577 -- --
colon   19 / 151167 1 / 98089 77 / 643586 0 / 26551 19 / 151167 1 / 98089 77 / 643586
ear 6 / 16130 -- -- -- 6 / 16130 -- -- --
embryonic tissue 26 / 246043   -- -- 26 / 246043 0 / 38 -- --
endocrine 1 / 19564 3 / 2857 -- -- 1 / 19564 3 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 11 / 128826 8 / 46440 2 / 85898 1155 / 12434232 11 / 128826 8 / 46440 2 / 85898 1155 / 12434232
gastrointestinal tract 4 / 28803 2 / 12721 6 / 45908 -- 4 / 28803 2 / 12721 6 / 45908 --
heart 17 / 76442   16 / 83063 -- 17 / 76442 0 / 1 16 / 83063 --
kidney 7 / 106627 13 / 89898 17 / 155372 7 / 100281 7 / 106627 13 / 89898 17 / 155372 7 / 100281
limb -- -- -- -- -- -- -- --
liver 18 / 96846 28 / 107249 14 / 66308 42 / 214987 18 / 96846 28 / 107249 14 / 66308 42 / 214987
lung 31 / 128150 16 / 170663 19 / 159917 23 / 159059 31 / 128150 16 / 170663 19 / 159917 23 / 159059
lymph node   5 / 27007 477 / 5278419 2387 / 4863489 0 / 62650 5 / 27007 477 / 5278419 2387 / 4863489
lymphoreticular 1 / 17836 14 / 44303 -- -- 1 / 17836 14 / 44303 -- --
mammary gland 4 / 46553 6 / 104307 1960 / 43166038 6208 / 30312656 4 / 46553 6 / 104307 1960 / 43166038 6208 / 30312656
muscle 8 / 74039   9 / 107836 19 / 61270 8 / 74039 0 / 27691 9 / 107836 19 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 3 / 11462 6 / 89988 20 / 94887 28 / 179472 3 / 11462 6 / 89988 20 / 94887 28 / 179472
pancreas 7 / 7237 5 / 74930 10 / 85728 38 / 189999 7 / 7237 5 / 74930 10 / 85728 38 / 189999
pancreatic islet 26 / 96524 5 / 30072 -- -- 26 / 96524 5 / 30072 -- --
parathyroid   24 / 20557 -- -- 0 / 24 24 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260 1 / 1358 -- -- 1 / 13260 1 / 1358 -- --
placenta 37 / 241088 4 / 39531 43 / 207348 -- 37 / 241088 4 / 39531 43 / 207348 --
pooled tissue 51 / 276455   -- -- 51 / 276455 0 / 0 -- --
prostate 12 / 79993 15 / 107080 55 / 266949 98 / 491794 12 / 79993 15 / 107080 55 / 266949 98 / 491794
retina 1 / 29438 -- 56 / 820326 41 / 88490 1 / 29438 -- 56 / 820326 41 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 18 / 73633 9 / 125377 2506 / 26905847 4086 / 34522313 18 / 73633 9 / 125377 2506 / 26905847 4086 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 2260 / 6230144 -- -- -- 2260 / 6230144 --
stomach   10 / 65644 21 / 124767 52 / 448716 0 / 26641 10 / 65644 21 / 124767 52 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 10 / 143630 15 / 100058 -- 10128 / 12372003 10 / 143630 15 / 100058 -- 10128 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606 13 / 115938 24 / 124664 0 / 11737 2 / 32606 13 / 115938 24 / 124664
uncharacterized tissue 49 / 207932 63 / 479819 5 / 21833 11 / 51729 49 / 207932 63 / 479819 5 / 21833 11 / 51729
uterus 13 / 38063 26 / 133582 1192 / 10193077 -- 13 / 38063 26 / 133582 1192 / 10193077 --
vascular 11 / 46250 -- 1583 / 13135050 -- 11 / 46250 -- 1583 / 13135050 --
white blood cells -- -- 115 / 846268 -- -- -- 115 / 846268 --
whole body -- -- -- -- -- -- -- --