Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.333427Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 140 / 3316537 111 / 2498449 2644 / 114162531 2146 / 109592465 140 / 3316537 111 / 2498449 2644 / 114162531 2146 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 -- 10 / 83577 0 / 16077 2 / 57865 -- 10 / 83577
bone marrow 2 / 14774 8 / 29891 101 / 5047110 129 / 4978364 2 / 14774 8 / 29891 101 / 5047110 129 / 4978364
brain 4 / 506301 17 / 200215 55 / 729526 441 / 4997811 4 / 506301 17 / 200215 55 / 729526 441 / 4997811
cartilage     -- 70 / 778035 0 / 15965 0 / 37226 -- 70 / 778035
cerebellum 3 / 90353   8 / 90885 122 / 1495938 3 / 90353 0 / 0 8 / 90885 122 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   3 / 151167 10 / 98089 87 / 643586 0 / 26551 3 / 151167 10 / 98089 87 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 14 / 246043   -- -- 14 / 246043 0 / 38 -- --
endocrine 4 / 19564 1 / 2857 -- -- 4 / 19564 1 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 9 / 128826 1 / 46440 4 / 85898 97 / 12434232 9 / 128826 1 / 46440 4 / 85898 97 / 12434232
gastrointestinal tract 1 / 28803   2 / 45908 -- 1 / 28803 0 / 12721 2 / 45908 --
heart 5 / 76442   13 / 83063 -- 5 / 76442 0 / 1 13 / 83063 --
kidney 6 / 106627 12 / 89898 20 / 155372 2 / 100281 6 / 106627 12 / 89898 20 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 4 / 107249 1 / 66308 3 / 214987 2 / 96846 4 / 107249 1 / 66308 3 / 214987
lung 7 / 128150 8 / 170663 16 / 159917 31 / 159059 7 / 128150 8 / 170663 16 / 159917 31 / 159059
lymph node 2 / 62650   364 / 5278419 61 / 4863489 2 / 62650 0 / 27007 364 / 5278419 61 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland   2 / 104307 1326 / 43166038 484 / 30312656 0 / 46553 2 / 104307 1326 / 43166038 484 / 30312656
muscle 15 / 74039 2 / 27691 18 / 107836 5 / 61270 15 / 74039 2 / 27691 18 / 107836 5 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   8 / 89988 3 / 94887 16 / 179472 0 / 11462 8 / 89988 3 / 94887 16 / 179472
pancreas   2 / 74930 11 / 85728 17 / 189999 0 / 7237 2 / 74930 11 / 85728 17 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland 2 / 6170 -- -- -- 2 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 4 / 241088   7 / 207348 -- 4 / 241088 0 / 39531 7 / 207348 --
pooled tissue 20 / 276455   -- -- 20 / 276455 0 / 0 -- --
prostate 1 / 79993 14 / 107080 39 / 266949 120 / 491794 1 / 79993 14 / 107080 39 / 266949 120 / 491794
retina 1 / 29438 -- 48 / 820326   1 / 29438 -- 48 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633 2 / 125377 74 / 26905847 62 / 34522313 3 / 73633 2 / 125377 74 / 26905847 62 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 308 / 6230144 -- -- -- 308 / 6230144 --
stomach 2 / 26641   8 / 124767 27 / 448716 2 / 26641 0 / 65644 8 / 124767 27 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 5 / 143630 1 / 100058 -- 347 / 12372003 5 / 143630 1 / 100058 -- 347 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 2 / 11737   10 / 115938 13 / 124664 2 / 11737 0 / 32606 10 / 115938 13 / 124664
uncharacterized tissue 8 / 207932 20 / 479819 2 / 21833 2 / 51729 8 / 207932 20 / 479819 2 / 21833 2 / 51729
uterus 1 / 38063 3 / 133582 121 / 10193077 -- 1 / 38063 3 / 133582 121 / 10193077 --
vascular 1 / 46250 -- 30 / 13135050 -- 1 / 46250 -- 30 / 13135050 --
white blood cells -- -- 45 / 846268 -- -- -- 45 / 846268 --
whole body -- -- -- -- -- -- -- --