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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.309849Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 338 / 3316537 205 / 2498449 2230 / 114162531 2308 / 109592465 338 / 3316537 205 / 2498449 2230 / 114162531 2308 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 3 / 16077 3 / 57865 --   3 / 16077 3 / 57865 -- 0 / 83577
bone marrow   2 / 29891 93 / 5047110 62 / 4978364 0 / 14774 2 / 29891 93 / 5047110 62 / 4978364
brain 74 / 506301 19 / 200215 22 / 729526 199 / 4997811 74 / 506301 19 / 200215 22 / 729526 199 / 4997811
cartilage 2 / 15965 4 / 37226 -- 6 / 778035 2 / 15965 4 / 37226 -- 6 / 778035
cerebellum 15 / 90353   7 / 90885 42 / 1495938 15 / 90353 0 / 0 7 / 90885 42 / 1495938
cerebrum 43 / 198932 1 / 3422 -- -- 43 / 198932 1 / 3422 -- --
cervix 2 / 3888   -- -- 2 / 3888 0 / 44577 -- --
colon 4 / 26551 15 / 151167 1 / 98089 13 / 643586 4 / 26551 15 / 151167 1 / 98089 13 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 12 / 246043   -- -- 12 / 246043 0 / 38 -- --
endocrine 4 / 19564   -- -- 4 / 19564 0 / 2857 -- --
esophagus   3 / 17290 -- -- 0 / 270 3 / 17290 -- --
eye 6 / 128826 3 / 46440 1 / 85898 390 / 12434232 6 / 128826 3 / 46440 1 / 85898 390 / 12434232
gastrointestinal tract 8 / 28803 2 / 12721 2 / 45908 -- 8 / 28803 2 / 12721 2 / 45908 --
heart 9 / 76442   4 / 83063 -- 9 / 76442 0 / 1 4 / 83063 --
kidney 15 / 106627 12 / 89898 1 / 155372 2 / 100281 15 / 106627 12 / 89898 1 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 4 / 107249 1 / 66308 4 / 214987 2 / 96846 4 / 107249 1 / 66308 4 / 214987
lung 6 / 128150 5 / 170663 5 / 159917 5 / 159059 6 / 128150 5 / 170663 5 / 159917 5 / 159059
lymph node 6 / 62650 1 / 27007 100 / 5278419 33 / 4863489 6 / 62650 1 / 27007 100 / 5278419 33 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 11 / 46553 9 / 104307 112 / 43166038 447 / 30312656 11 / 46553 9 / 104307 112 / 43166038 447 / 30312656
muscle 7 / 74039   5 / 107836 1 / 61270 7 / 74039 0 / 27691 5 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   11 / 89988   2 / 179472 0 / 11462 11 / 89988 0 / 94887 2 / 179472
pancreas   2 / 74930 1 / 85728 10 / 189999 0 / 7237 2 / 74930 1 / 85728 10 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 9 / 241088 2 / 39531 5 / 207348 -- 9 / 241088 2 / 39531 5 / 207348 --
pooled tissue 21 / 276455   -- -- 21 / 276455 0 / 0 -- --
prostate 7 / 79993   8 / 266949 12 / 491794 7 / 79993 0 / 107080 8 / 266949 12 / 491794
retina 2 / 29438 -- 12 / 820326 2 / 88490 2 / 29438 -- 12 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633 4 / 125377 990 / 26905847 902 / 34522313 3 / 73633 4 / 125377 990 / 26905847 902 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 10 / 52939   -- -- 10 / 52939 0 / 5 -- --
stem cell -- -- 96 / 6230144 -- -- -- 96 / 6230144 --
stomach 2 / 26641 2 / 65644 2 / 124767 12 / 448716 2 / 26641 2 / 65644 2 / 124767 12 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 18 / 143630 23 / 100058 -- 157 / 12372003 18 / 143630 23 / 100058 -- 157 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 1 / 32606 5 / 115938 6 / 124664 1 / 11737 1 / 32606 5 / 115938 6 / 124664
uncharacterized tissue 28 / 207932 59 / 479819   1 / 51729 28 / 207932 59 / 479819 0 / 21833 1 / 51729
uterus   16 / 133582 449 / 10193077 -- 0 / 38063 16 / 133582 449 / 10193077 --
vascular 4 / 46250 -- 268 / 13135050 -- 4 / 46250 -- 268 / 13135050 --
white blood cells -- -- 40 / 846268 -- -- -- 40 / 846268 --
whole body -- -- -- -- -- -- -- --