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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.298705Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 54 / 3316537 13 / 2498449 22855 / 114162531 31193 / 109592465 54 / 3316537 13 / 2498449 22855 / 114162531 31193 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 --   0 / 16077 1 / 57865 -- 0 / 83577
bone marrow     734 / 5047110 359 / 4978364 0 / 14774 0 / 29891 734 / 5047110 359 / 4978364
brain 9 / 506301 2 / 200215 392 / 729526 3482 / 4997811 9 / 506301 2 / 200215 392 / 729526 3482 / 4997811
cartilage     -- 28 / 778035 0 / 15965 0 / 37226 -- 28 / 778035
cerebellum     45 / 90885 475 / 1495938 0 / 90353 0 / 0 45 / 90885 475 / 1495938
cerebrum 2 / 198932   -- -- 2 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   1 / 151167 9 / 98089 63 / 643586 0 / 26551 1 / 151167 9 / 98089 63 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 4 / 246043   -- -- 4 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 1 / 128826   12 / 85898 8365 / 12434232 1 / 128826 0 / 46440 12 / 85898 8365 / 12434232
gastrointestinal tract     36 / 45908 -- 0 / 28803 0 / 12721 36 / 45908 --
heart     27 / 83063 -- 0 / 76442 0 / 1 27 / 83063 --
kidney 1 / 106627 1 / 89898 24 / 155372 10 / 100281 1 / 106627 1 / 89898 24 / 155372 10 / 100281
limb -- -- -- -- -- -- -- --
liver     30 / 66308 21 / 214987 0 / 96846 0 / 107249 30 / 66308 21 / 214987
lung     51 / 159917 32 / 159059 0 / 128150 0 / 170663 51 / 159917 32 / 159059
lymph node     765 / 5278419 316 / 4863489 0 / 62650 0 / 27007 765 / 5278419 316 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland     1891 / 43166038 9628 / 30312656 0 / 46553 0 / 104307 1891 / 43166038 9628 / 30312656
muscle   1 / 27691 24 / 107836 7 / 61270 0 / 74039 1 / 27691 24 / 107836 7 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462   2 / 94887 25 / 179472 1 / 11462 0 / 89988 2 / 94887 25 / 179472
pancreas     4 / 85728 15 / 189999 0 / 7237 0 / 74930 4 / 85728 15 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 3 / 241088   60 / 207348 -- 3 / 241088 0 / 39531 60 / 207348 --
pooled tissue 9 / 276455   -- -- 9 / 276455 0 / 0 -- --
prostate 2 / 79993 1 / 107080 32 / 266949 25 / 491794 2 / 79993 1 / 107080 32 / 266949 25 / 491794
retina 2 / 29438 -- 1181 / 820326 49 / 88490 2 / 29438 -- 1181 / 820326 49 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 1 / 125377 8271 / 26905847 6609 / 34522313 1 / 73633 1 / 125377 8271 / 26905847 6609 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 1616 / 6230144 -- -- -- 1616 / 6230144 --
stomach     113 / 124767 75 / 448716 0 / 26641 0 / 65644 113 / 124767 75 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 12 / 143630   -- 1546 / 12372003 12 / 143630 0 / 100058 -- 1546 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     96 / 115938 50 / 124664 0 / 11737 0 / 32606 96 / 115938 50 / 124664
uncharacterized tissue 1 / 207932 2 / 479819 1 / 21833 13 / 51729 1 / 207932 2 / 479819 1 / 21833 13 / 51729
uterus     5167 / 10193077 -- 0 / 38063 0 / 133582 5167 / 10193077 --
vascular 4 / 46250 -- 1797 / 13135050 -- 4 / 46250 -- 1797 / 13135050 --
white blood cells -- -- 475 / 846268 -- -- -- 475 / 846268 --
whole body -- -- -- -- -- -- -- --