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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.297413Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 758 / 3316537 214 / 2498449 2224 / 114162531 118760 / 109592465 758 / 3316537 214 / 2498449 2224 / 114162531 118760 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 8 / 16077 1 / 57865 -- 27 / 83577 8 / 16077 1 / 57865 -- 27 / 83577
bone marrow     11 / 5047110   0 / 14774 0 / 29891 11 / 5047110 0 / 4978364
brain 9 / 506301 7 / 200215 1 / 729526 22 / 4997811 9 / 506301 7 / 200215 1 / 729526 22 / 4997811
cartilage   1 / 37226 -- 45 / 778035 0 / 15965 1 / 37226 -- 45 / 778035
cerebellum       2 / 1495938 0 / 90353 0 / 0 0 / 90885 2 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   7 / 151167   1 / 643586 0 / 26551 7 / 151167 0 / 98089 1 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 18 / 246043   -- -- 18 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   3 / 17290 -- -- 0 / 270 3 / 17290 -- --
eye 3 / 128826     306 / 12434232 3 / 128826 0 / 46440 0 / 85898 306 / 12434232
gastrointestinal tract 3 / 28803     -- 3 / 28803 0 / 12721 0 / 45908 --
heart     2 / 83063 -- 0 / 76442 0 / 1 2 / 83063 --
kidney   1 / 89898   3 / 100281 0 / 106627 1 / 89898 0 / 155372 3 / 100281
limb -- -- -- -- -- -- -- --
liver   1 / 107249     0 / 96846 1 / 107249 0 / 66308 0 / 214987
lung 1 / 128150 5 / 170663 23 / 159917 5 / 159059 1 / 128150 5 / 170663 23 / 159917 5 / 159059
lymph node   5 / 27007 1232 / 5278419 81 / 4863489 0 / 62650 5 / 27007 1232 / 5278419 81 / 4863489
lymphoreticular 4 / 17836   -- -- 4 / 17836 0 / 44303 -- --
mammary gland   4 / 104307 158 / 43166038 105735 / 30312656 0 / 46553 4 / 104307 158 / 43166038 105735 / 30312656
muscle         0 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 2 / 11462     1 / 179472 2 / 11462 0 / 89988 0 / 94887 1 / 179472
pancreas   4 / 74930     0 / 7237 4 / 74930 0 / 85728 0 / 189999
pancreatic islet 1 / 96524 4 / 30072 -- -- 1 / 96524 4 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta       -- 0 / 241088 0 / 39531 0 / 207348 --
pooled tissue 5 / 276455   -- -- 5 / 276455 0 / 0 -- --
prostate 1 / 79993   4 / 266949   1 / 79993 0 / 107080 4 / 266949 0 / 491794
retina   -- 4 / 820326 1 / 88490 0 / 29438 -- 4 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin     477 / 26905847 12364 / 34522313 0 / 73633 0 / 125377 477 / 26905847 12364 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 19 / 52939   -- -- 19 / 52939 0 / 5 -- --
stem cell -- -- 53 / 6230144 -- -- -- 53 / 6230144 --
stomach 1 / 26641     16 / 448716 1 / 26641 0 / 65644 0 / 124767 16 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 150 / 12372003 0 / 143630 0 / 100058 -- 150 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     1 / 115938 1 / 124664 0 / 11737 0 / 32606 1 / 115938 1 / 124664
uncharacterized tissue 683 / 207932 165 / 479819     683 / 207932 165 / 479819 0 / 21833 0 / 51729
uterus   4 / 133582 9 / 10193077 -- 0 / 38063 4 / 133582 9 / 10193077 --
vascular   -- 15 / 13135050 -- 0 / 46250 -- 15 / 13135050 --
white blood cells -- -- 234 / 846268 -- -- -- 234 / 846268 --
whole body -- -- -- -- -- -- -- --