Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.29106Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 187 / 3316537 79 / 2498449 3760 / 114162531 4408 / 109592465 187 / 3316537 79 / 2498449 3760 / 114162531 4408 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 2 / 57865 --   1 / 16077 2 / 57865 -- 0 / 83577
bone marrow 4 / 14774 1 / 29891 23 / 5047110 30 / 4978364 4 / 14774 1 / 29891 23 / 5047110 30 / 4978364
brain 25 / 506301 4 / 200215 13 / 729526 153 / 4997811 25 / 506301 4 / 200215 13 / 729526 153 / 4997811
cartilage   2 / 37226 -- 17 / 778035 0 / 15965 2 / 37226 -- 17 / 778035
cerebellum 2 / 90353     32 / 1495938 2 / 90353 0 / 0 0 / 90885 32 / 1495938
cerebrum 21 / 198932   -- -- 21 / 198932 0 / 3422 -- --
cervix 1 / 3888   -- -- 1 / 3888 0 / 44577 -- --
colon   7 / 151167 2 / 98089 33 / 643586 0 / 26551 7 / 151167 2 / 98089 33 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 8 / 246043   -- -- 8 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 1 / 128826 1 / 46440 2 / 85898 525 / 12434232 1 / 128826 1 / 46440 2 / 85898 525 / 12434232
gastrointestinal tract 2 / 28803   1 / 45908 -- 2 / 28803 0 / 12721 1 / 45908 --
heart 6 / 76442   2 / 83063 -- 6 / 76442 0 / 1 2 / 83063 --
kidney 2 / 106627 4 / 89898 8 / 155372 10 / 100281 2 / 106627 4 / 89898 8 / 155372 10 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 3 / 107249 5 / 66308 13 / 214987 1 / 96846 3 / 107249 5 / 66308 13 / 214987
lung 10 / 128150 9 / 170663 10 / 159917 12 / 159059 10 / 128150 9 / 170663 10 / 159917 12 / 159059
lymph node 9 / 62650   128 / 5278419 32 / 4863489 9 / 62650 0 / 27007 128 / 5278419 32 / 4863489
lymphoreticular   5 / 44303 -- -- 0 / 17836 5 / 44303 -- --
mammary gland 5 / 46553 4 / 104307 435 / 43166038 1242 / 30312656 5 / 46553 4 / 104307 435 / 43166038 1242 / 30312656
muscle 2 / 74039 1 / 27691   1 / 61270 2 / 74039 1 / 27691 0 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary     7 / 94887 7 / 179472 0 / 11462 0 / 89988 7 / 94887 7 / 179472
pancreas   4 / 74930   5 / 189999 0 / 7237 4 / 74930 0 / 85728 5 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 8 / 241088 1 / 39531 19 / 207348 -- 8 / 241088 1 / 39531 19 / 207348 --
pooled tissue 27 / 276455   -- -- 27 / 276455 0 / 0 -- --
prostate 1 / 79993 1 / 107080 6 / 266949 32 / 491794 1 / 79993 1 / 107080 6 / 266949 32 / 491794
retina   -- 35 / 820326 2 / 88490 0 / 29438 -- 35 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 9 / 73633 2 / 125377 1756 / 26905847 1780 / 34522313 9 / 73633 2 / 125377 1756 / 26905847 1780 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 11 / 52939   -- -- 11 / 52939 0 / 5 -- --
stem cell -- -- 155 / 6230144 -- -- -- 155 / 6230144 --
stomach 1 / 26641   16 / 124767 22 / 448716 1 / 26641 0 / 65644 16 / 124767 22 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 8 / 143630 1 / 100058 -- 442 / 12372003 8 / 143630 1 / 100058 -- 442 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606 8 / 115938 16 / 124664 0 / 11737 2 / 32606 8 / 115938 16 / 124664
uncharacterized tissue 13 / 207932 19 / 479819   2 / 51729 13 / 207932 19 / 479819 0 / 21833 2 / 51729
uterus 2 / 38063 5 / 133582 294 / 10193077 -- 2 / 38063 5 / 133582 294 / 10193077 --
vascular 3 / 46250 -- 796 / 13135050 -- 3 / 46250 -- 796 / 13135050 --
white blood cells -- -- 39 / 846268 -- -- -- 39 / 846268 --
whole body -- -- -- -- -- -- -- --