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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.283749Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 261 / 3316537 93 / 2498449 1684 / 114162531 1432 / 109592465 261 / 3316537 93 / 2498449 1684 / 114162531 1432 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 4 / 57865 --   1 / 16077 4 / 57865 -- 0 / 83577
bone marrow     9 / 5047110   0 / 14774 0 / 29891 9 / 5047110 0 / 4978364
brain 11 / 506301 1 / 200215 1 / 729526 25 / 4997811 11 / 506301 1 / 200215 1 / 729526 25 / 4997811
cartilage 2 / 15965 4 / 37226 -- 2 / 778035 2 / 15965 4 / 37226 -- 2 / 778035
cerebellum 2 / 90353     7 / 1495938 2 / 90353 0 / 0 0 / 90885 7 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix 1 / 3888   -- -- 1 / 3888 0 / 44577 -- --
colon   7 / 151167   2 / 643586 0 / 26551 7 / 151167 0 / 98089 2 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 5 / 246043   -- -- 5 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826     125 / 12434232 4 / 128826 0 / 46440 0 / 85898 125 / 12434232
gastrointestinal tract 3 / 28803     -- 3 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442   1 / 83063 -- 1 / 76442 0 / 1 1 / 83063 --
kidney 7 / 106627 7 / 89898   1 / 100281 7 / 106627 7 / 89898 0 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 78 / 96846 11 / 107249 93 / 66308   78 / 96846 11 / 107249 93 / 66308 0 / 214987
lung 23 / 128150 6 / 170663 1 / 159917   23 / 128150 6 / 170663 1 / 159917 0 / 159059
lymph node     37 / 5278419 25 / 4863489 0 / 62650 0 / 27007 37 / 5278419 25 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 3 / 46553 9 / 104307 24 / 43166038 563 / 30312656 3 / 46553 9 / 104307 24 / 43166038 563 / 30312656
muscle 2 / 74039       2 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary         0 / 11462 0 / 89988 0 / 94887 0 / 179472
pancreas 2 / 7237 3 / 74930 1 / 85728   2 / 7237 3 / 74930 1 / 85728 0 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 10 / 241088   3 / 207348 -- 10 / 241088 0 / 39531 3 / 207348 --
pooled tissue 44 / 276455   -- -- 44 / 276455 0 / 0 -- --
prostate 15 / 79993 10 / 107080 2 / 266949 3 / 491794 15 / 79993 10 / 107080 2 / 266949 3 / 491794
retina 1 / 29438 -- 4 / 820326   1 / 29438 -- 4 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 1 / 125377 875 / 26905847 584 / 34522313 4 / 73633 1 / 125377 875 / 26905847 584 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 93 / 6230144 -- -- -- 93 / 6230144 --
stomach   3 / 65644 5 / 124767 10 / 448716 0 / 26641 3 / 65644 5 / 124767 10 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 5 / 143630 1 / 100058 -- 81 / 12372003 5 / 143630 1 / 100058 -- 81 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     1 / 115938 1 / 124664 0 / 11737 0 / 32606 1 / 115938 1 / 124664
uncharacterized tissue 12 / 207932 21 / 479819   3 / 51729 12 / 207932 21 / 479819 0 / 21833 3 / 51729
uterus 10 / 38063 3 / 133582 278 / 10193077 -- 10 / 38063 3 / 133582 278 / 10193077 --
vascular 3 / 46250 -- 253 / 13135050 -- 3 / 46250 -- 253 / 13135050 --
white blood cells -- -- 3 / 846268 -- -- -- 3 / 846268 --
whole body -- -- -- -- -- -- -- --