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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.279669Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 303 / 3316537 309 / 2498449 2869 / 114162531 6509 / 109592465 303 / 3316537 309 / 2498449 2869 / 114162531 6509 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 10 / 57865 --   1 / 16077 10 / 57865 -- 0 / 83577
bone marrow 2 / 14774 1 / 29891 32 / 5047110 37 / 4978364 2 / 14774 1 / 29891 32 / 5047110 37 / 4978364
brain 37 / 506301 28 / 200215 27 / 729526 239 / 4997811 37 / 506301 28 / 200215 27 / 729526 239 / 4997811
cartilage   2 / 37226 -- 27 / 778035 0 / 15965 2 / 37226 -- 27 / 778035
cerebellum 4 / 90353   4 / 90885 78 / 1495938 4 / 90353 0 / 0 4 / 90885 78 / 1495938
cerebrum 13 / 198932   -- -- 13 / 198932 0 / 3422 -- --
cervix   7 / 44577 -- -- 0 / 3888 7 / 44577 -- --
colon 1 / 26551 20 / 151167 1 / 98089 71 / 643586 1 / 26551 20 / 151167 1 / 98089 71 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 30 / 246043   -- -- 30 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 7 / 128826 12 / 46440 6 / 85898 2286 / 12434232 7 / 128826 12 / 46440 6 / 85898 2286 / 12434232
gastrointestinal tract 2 / 28803   2 / 45908 -- 2 / 28803 0 / 12721 2 / 45908 --
heart 1 / 76442   1 / 83063 -- 1 / 76442 0 / 1 1 / 83063 --
kidney 11 / 106627 9 / 89898 11 / 155372 10 / 100281 11 / 106627 9 / 89898 11 / 155372 10 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 12 / 107249 3 / 66308 10 / 214987 4 / 96846 12 / 107249 3 / 66308 10 / 214987
lung 15 / 128150 23 / 170663 11 / 159917 6 / 159059 15 / 128150 23 / 170663 11 / 159917 6 / 159059
lymph node 6 / 62650 2 / 27007 70 / 5278419 39 / 4863489 6 / 62650 2 / 27007 70 / 5278419 39 / 4863489
lymphoreticular 3 / 17836 9 / 44303 -- -- 3 / 17836 9 / 44303 -- --
mammary gland 2 / 46553 11 / 104307 747 / 43166038 1057 / 30312656 2 / 46553 11 / 104307 747 / 43166038 1057 / 30312656
muscle 3 / 74039 3 / 27691   2 / 61270 3 / 74039 3 / 27691 0 / 107836 2 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988 15 / 94887 15 / 179472 0 / 11462 3 / 89988 15 / 94887 15 / 179472
pancreas   4 / 74930   15 / 189999 0 / 7237 4 / 74930 0 / 85728 15 / 189999
pancreatic islet 1 / 96524 2 / 30072 -- -- 1 / 96524 2 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 34 / 241088 5 / 39531 10 / 207348 -- 34 / 241088 5 / 39531 10 / 207348 --
pooled tissue 31 / 276455   -- -- 31 / 276455 0 / 0 -- --
prostate 3 / 79993 3 / 107080 5 / 266949 33 / 491794 3 / 79993 3 / 107080 5 / 266949 33 / 491794
retina 3 / 29438 -- 33 / 820326 9 / 88490 3 / 29438 -- 33 / 820326 9 / 88490
salivary gland 1 / 2490 1 / 10368 -- -- 1 / 2490 1 / 10368 -- --
skin 4 / 73633 21 / 125377 701 / 26905847 1755 / 34522313 4 / 73633 21 / 125377 701 / 26905847 1755 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 506 / 6230144 -- -- -- 506 / 6230144 --
stomach 1 / 26641 11 / 65644 2 / 124767 42 / 448716 1 / 26641 11 / 65644 2 / 124767 42 / 448716
synovium   1 / 1650 -- -- 0 / 249 1 / 1650 -- --
testis 64 / 143630 7 / 100058 -- 765 / 12372003 64 / 143630 7 / 100058 -- 765 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   5 / 32606 2 / 115938 4 / 124664 0 / 11737 5 / 32606 2 / 115938 4 / 124664
uncharacterized tissue 8 / 207932 73 / 479819   9 / 51729 8 / 207932 73 / 479819 0 / 21833 9 / 51729
uterus 6 / 38063 24 / 133582 103 / 10193077 -- 6 / 38063 24 / 133582 103 / 10193077 --
vascular   -- 565 / 13135050 -- 0 / 46250 -- 565 / 13135050 --
white blood cells -- -- 12 / 846268 -- -- -- 12 / 846268 --
whole body -- -- -- -- -- -- -- --