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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.271940Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 64 / 3316537 87 / 2498449 1268 / 114162531 457 / 109592465 64 / 3316537 87 / 2498449 1268 / 114162531 457 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow       82 / 4978364 0 / 14774 0 / 29891 0 / 5047110 82 / 4978364
brain 2 / 506301 1 / 200215 3 / 729526 16 / 4997811 2 / 506301 1 / 200215 3 / 729526 16 / 4997811
cartilage     -- 3 / 778035 0 / 15965 0 / 37226 -- 3 / 778035
cerebellum 1 / 90353     2 / 1495938 1 / 90353 0 / 0 0 / 90885 2 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 1 / 26551 7 / 151167 2 / 98089 9 / 643586 1 / 26551 7 / 151167 2 / 98089 9 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 7 / 246043   -- -- 7 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye       12 / 12434232 0 / 128826 0 / 46440 0 / 85898 12 / 12434232
gastrointestinal tract   1 / 12721   -- 0 / 28803 1 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney   6 / 89898 4 / 155372 4 / 100281 0 / 106627 6 / 89898 4 / 155372 4 / 100281
limb -- -- -- -- -- -- -- --
liver   2 / 107249   2 / 214987 0 / 96846 2 / 107249 0 / 66308 2 / 214987
lung 3 / 128150 6 / 170663   1 / 159059 3 / 128150 6 / 170663 0 / 159917 1 / 159059
lymph node 2 / 62650 1 / 27007 25 / 5278419   2 / 62650 1 / 27007 25 / 5278419 0 / 4863489
lymphoreticular   18 / 44303 -- -- 0 / 17836 18 / 44303 -- --
mammary gland 5 / 46553 3 / 104307 708 / 43166038 148 / 30312656 5 / 46553 3 / 104307 708 / 43166038 148 / 30312656
muscle       1 / 61270 0 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988 3 / 94887 2 / 179472 0 / 11462 3 / 89988 3 / 94887 2 / 179472
pancreas   3 / 74930 1 / 85728 3 / 189999 0 / 7237 3 / 74930 1 / 85728 3 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 16 / 241088 1 / 39531 1 / 207348 -- 16 / 241088 1 / 39531 1 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 1 / 79993   1 / 266949 3 / 491794 1 / 79993 0 / 107080 1 / 266949 3 / 491794
retina   -- 1 / 820326   0 / 29438 -- 1 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 5 / 125377 102 / 26905847 118 / 34522313 1 / 73633 5 / 125377 102 / 26905847 118 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 9 / 6230144 -- -- -- 9 / 6230144 --
stomach   2 / 65644   5 / 448716 0 / 26641 2 / 65644 0 / 124767 5 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 46 / 12372003 0 / 143630 0 / 100058 -- 46 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606 1 / 115938   0 / 11737 2 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 8 / 207932 21 / 479819     8 / 207932 21 / 479819 0 / 21833 0 / 51729
uterus   3 / 133582 75 / 10193077 -- 0 / 38063 3 / 133582 75 / 10193077 --
vascular 3 / 46250 -- 299 / 13135050 -- 3 / 46250 -- 299 / 13135050 --
white blood cells -- -- 33 / 846268 -- -- -- 33 / 846268 --
whole body -- -- -- -- -- -- -- --