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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.268963Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 369 / 3316537 250 / 2498449 4758 / 114162531 1872 / 109592465 369 / 3316537 250 / 2498449 4758 / 114162531 1872 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 4 / 57865 -- 2 / 83577 1 / 16077 4 / 57865 -- 2 / 83577
bone marrow 3 / 14774 3 / 29891 28 / 5047110 71 / 4978364 3 / 14774 3 / 29891 28 / 5047110 71 / 4978364
brain 91 / 506301 12 / 200215 25 / 729526 148 / 4997811 91 / 506301 12 / 200215 25 / 729526 148 / 4997811
cartilage 3 / 15965 5 / 37226 -- 17 / 778035 3 / 15965 5 / 37226 -- 17 / 778035
cerebellum 4 / 90353   2 / 90885 21 / 1495938 4 / 90353 0 / 0 2 / 90885 21 / 1495938
cerebrum 29 / 198932   -- -- 29 / 198932 0 / 3422 -- --
cervix   6 / 44577 -- -- 0 / 3888 6 / 44577 -- --
colon 9 / 26551 17 / 151167   5 / 643586 9 / 26551 17 / 151167 0 / 98089 5 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 15 / 246043   -- -- 15 / 246043 0 / 38 -- --
endocrine 4 / 19564   -- -- 4 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 3 / 128826 2 / 46440   178 / 12434232 3 / 128826 2 / 46440 0 / 85898 178 / 12434232
gastrointestinal tract 7 / 28803 1 / 12721 1 / 45908 -- 7 / 28803 1 / 12721 1 / 45908 --
heart 12 / 76442     -- 12 / 76442 0 / 1 0 / 83063 --
kidney 16 / 106627 16 / 89898 1 / 155372 1 / 100281 16 / 106627 16 / 89898 1 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 5 / 96846 9 / 107249 2 / 66308 2 / 214987 5 / 96846 9 / 107249 2 / 66308 2 / 214987
lung 12 / 128150 15 / 170663 5 / 159917 6 / 159059 12 / 128150 15 / 170663 5 / 159917 6 / 159059
lymph node 4 / 62650 3 / 27007 60 / 5278419 15 / 4863489 4 / 62650 3 / 27007 60 / 5278419 15 / 4863489
lymphoreticular 4 / 17836 8 / 44303 -- -- 4 / 17836 8 / 44303 -- --
mammary gland 5 / 46553 6 / 104307 4025 / 43166038 882 / 30312656 5 / 46553 6 / 104307 4025 / 43166038 882 / 30312656
muscle 5 / 74039   5 / 107836   5 / 74039 0 / 27691 5 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 9 / 89988   4 / 179472 1 / 11462 9 / 89988 0 / 94887 4 / 179472
pancreas   6 / 74930 1 / 85728 6 / 189999 0 / 7237 6 / 74930 1 / 85728 6 / 189999
pancreatic islet 2 / 96524 3 / 30072 -- -- 2 / 96524 3 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 12 / 241088 1 / 39531 5 / 207348 -- 12 / 241088 1 / 39531 5 / 207348 --
pooled tissue 39 / 276455   -- -- 39 / 276455 0 / 0 -- --
prostate 13 / 79993 3 / 107080 2 / 266949 13 / 491794 13 / 79993 3 / 107080 2 / 266949 13 / 491794
retina 2 / 29438 -- 24 / 820326 1 / 88490 2 / 29438 -- 24 / 820326 1 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 11 / 73633 7 / 125377 223 / 26905847 300 / 34522313 11 / 73633 7 / 125377 223 / 26905847 300 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 7 / 52939   -- -- 7 / 52939 0 / 5 -- --
stem cell -- -- 63 / 6230144 -- -- -- 63 / 6230144 --
stomach 1 / 26641 9 / 65644   18 / 448716 1 / 26641 9 / 65644 0 / 124767 18 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 9 / 143630 20 / 100058 -- 178 / 12372003 9 / 143630 20 / 100058 -- 178 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 2 / 115938 4 / 124664 0 / 11737 1 / 32606 2 / 115938 4 / 124664
uncharacterized tissue 18 / 207932 76 / 479819     18 / 207932 76 / 479819 0 / 21833 0 / 51729
uterus 5 / 38063 5 / 133582 195 / 10193077 -- 5 / 38063 5 / 133582 195 / 10193077 --
vascular 12 / 46250 -- 76 / 13135050 -- 12 / 46250 -- 76 / 13135050 --
white blood cells -- -- 13 / 846268 -- -- -- 13 / 846268 --
whole body -- -- -- -- -- -- -- --