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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.250666Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 328 / 3316537 77 / 2498449 3512 / 114162531 5245 / 109592465 328 / 3316537 77 / 2498449 3512 / 114162531 5245 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 --   0 / 16077 2 / 57865 -- 0 / 83577
bone marrow     32 / 5047110   0 / 14774 0 / 29891 32 / 5047110 0 / 4978364
brain 17 / 506301 5 / 200215 4 / 729526 114 / 4997811 17 / 506301 5 / 200215 4 / 729526 114 / 4997811
cartilage 1 / 15965 2 / 37226 -- 5 / 778035 1 / 15965 2 / 37226 -- 5 / 778035
cerebellum       9 / 1495938 0 / 90353 0 / 0 0 / 90885 9 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   7 / 151167 3 / 98089 15 / 643586 0 / 26551 7 / 151167 3 / 98089 15 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 25 / 246043   -- -- 25 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 17 / 128826   4 / 85898 37 / 12434232 17 / 128826 0 / 46440 4 / 85898 37 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart 2 / 76442   1 / 83063 -- 2 / 76442 0 / 1 1 / 83063 --
kidney 5 / 106627   5 / 155372 4 / 100281 5 / 106627 0 / 89898 5 / 155372 4 / 100281
limb -- -- -- -- -- -- -- --
liver 153 / 96846 1 / 107249 1 / 66308 30 / 214987 153 / 96846 1 / 107249 1 / 66308 30 / 214987
lung 10 / 128150 3 / 170663 5 / 159917 1 / 159059 10 / 128150 3 / 170663 5 / 159917 1 / 159059
lymph node   5 / 27007 5 / 5278419 2 / 4863489 0 / 62650 5 / 27007 5 / 5278419 2 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 2 / 104307 814 / 43166038 3966 / 30312656 1 / 46553 2 / 104307 814 / 43166038 3966 / 30312656
muscle 2 / 74039   5 / 107836   2 / 74039 0 / 27691 5 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   1 / 89988 5 / 94887 3 / 179472 0 / 11462 1 / 89988 5 / 94887 3 / 179472
pancreas 2 / 7237 3 / 74930   3 / 189999 2 / 7237 3 / 74930 0 / 85728 3 / 189999
pancreatic islet 9 / 96524   -- -- 9 / 96524 0 / 30072 -- --
parathyroid   5 / 20557 -- -- 0 / 24 5 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 16 / 241088   6 / 207348 -- 16 / 241088 0 / 39531 6 / 207348 --
pooled tissue 21 / 276455   -- -- 21 / 276455 0 / 0 -- --
prostate 12 / 79993 4 / 107080 10 / 266949 14 / 491794 12 / 79993 4 / 107080 10 / 266949 14 / 491794
retina 12 / 29438 -- 29 / 820326   12 / 29438 -- 29 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 5 / 125377 990 / 26905847 750 / 34522313 1 / 73633 5 / 125377 990 / 26905847 750 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 46 / 6230144 -- -- -- 46 / 6230144 --
stomach 1 / 26641 8 / 65644 10 / 124767 10 / 448716 1 / 26641 8 / 65644 10 / 124767 10 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630   -- 263 / 12372003 3 / 143630 0 / 100058 -- 263 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   1 / 32606 4 / 115938 17 / 124664 0 / 11737 1 / 32606 4 / 115938 17 / 124664
uncharacterized tissue 5 / 207932 16 / 479819   2 / 51729 5 / 207932 16 / 479819 0 / 21833 2 / 51729
uterus   6 / 133582 177 / 10193077 -- 0 / 38063 6 / 133582 177 / 10193077 --
vascular 1 / 46250 -- 1353 / 13135050 -- 1 / 46250 -- 1353 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --