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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.245540Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 148 / 3316537 93 / 2498449 1610 / 114162531 1584 / 109592465 148 / 3316537 93 / 2498449 1610 / 114162531 1584 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 -- 2 / 83577 0 / 16077 1 / 57865 -- 2 / 83577
bone marrow 1 / 14774 2 / 29891 232 / 5047110 75 / 4978364 1 / 14774 2 / 29891 232 / 5047110 75 / 4978364
brain 16 / 506301 7 / 200215 2 / 729526 34 / 4997811 16 / 506301 7 / 200215 2 / 729526 34 / 4997811
cartilage     -- 3 / 778035 0 / 15965 0 / 37226 -- 3 / 778035
cerebellum 3 / 90353     6 / 1495938 3 / 90353 0 / 0 0 / 90885 6 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon   8 / 151167   2 / 643586 0 / 26551 8 / 151167 0 / 98089 2 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 13 / 246043   -- -- 13 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 4 / 128826 1 / 46440 4 / 85898 107 / 12434232 4 / 128826 1 / 46440 4 / 85898 107 / 12434232
gastrointestinal tract   5 / 12721   -- 0 / 28803 5 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627 1 / 89898     1 / 106627 1 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 6 / 96846 2 / 107249     6 / 96846 2 / 107249 0 / 66308 0 / 214987
lung 8 / 128150 5 / 170663 2 / 159917   8 / 128150 5 / 170663 2 / 159917 0 / 159059
lymph node 2 / 62650 2 / 27007 18 / 5278419 6 / 4863489 2 / 62650 2 / 27007 18 / 5278419 6 / 4863489
lymphoreticular 3 / 17836   -- -- 3 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 1 / 104307 14 / 43166038 660 / 30312656 1 / 46553 1 / 104307 14 / 43166038 660 / 30312656
muscle 3 / 74039       3 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988   4 / 179472 0 / 11462 3 / 89988 0 / 94887 4 / 179472
pancreas   1 / 74930   2 / 189999 0 / 7237 1 / 74930 0 / 85728 2 / 189999
pancreatic islet 6 / 96524   -- -- 6 / 96524 0 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 16 / 241088 3 / 39531   -- 16 / 241088 3 / 39531 0 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 5 / 79993 1 / 107080   1 / 491794 5 / 79993 1 / 107080 0 / 266949 1 / 491794
retina   -- 1 / 820326 1 / 88490 0 / 29438 -- 1 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   9 / 125377 627 / 26905847 418 / 34522313 0 / 73633 9 / 125377 627 / 26905847 418 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 306 / 6230144 -- -- -- 306 / 6230144 --
stomach 1 / 26641 6 / 65644 2 / 124767 6 / 448716 1 / 26641 6 / 65644 2 / 124767 6 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 12 / 100058 -- 256 / 12372003 7 / 143630 12 / 100058 -- 256 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606   1 / 124664 0 / 11737 1 / 32606 0 / 115938 1 / 124664
uncharacterized tissue 27 / 207932 10 / 479819     27 / 207932 10 / 479819 0 / 21833 0 / 51729
uterus 1 / 38063 4 / 133582 78 / 10193077 -- 1 / 38063 4 / 133582 78 / 10193077 --
vascular 4 / 46250 -- 320 / 13135050 -- 4 / 46250 -- 320 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --