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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.229988Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 103 / 3316537 46 / 2498449 173 / 114162531 448 / 109592465 103 / 3316537 46 / 2498449 173 / 114162531 448 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow       2 / 4978364 0 / 14774 0 / 29891 0 / 5047110 2 / 4978364
brain 29 / 506301 4 / 200215 2 / 729526 47 / 4997811 29 / 506301 4 / 200215 2 / 729526 47 / 4997811
cartilage     -- 7 / 778035 0 / 15965 0 / 37226 -- 7 / 778035
cerebellum 4 / 90353     27 / 1495938 4 / 90353 0 / 0 0 / 90885 27 / 1495938
cerebrum 7 / 198932   -- -- 7 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   4 / 151167     0 / 26551 4 / 151167 0 / 98089 0 / 643586
ear 8 / 16130 -- -- -- 8 / 16130 -- -- --
embryonic tissue 10 / 246043   -- -- 10 / 246043 0 / 38 -- --
endocrine 3 / 19564   -- -- 3 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye       32 / 12434232 0 / 128826 0 / 46440 0 / 85898 32 / 12434232
gastrointestinal tract 2 / 28803   1 / 45908 -- 2 / 28803 0 / 12721 1 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627   1 / 155372 1 / 100281 1 / 106627 0 / 89898 1 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 1 / 107249   1 / 214987 1 / 96846 1 / 107249 0 / 66308 1 / 214987
lung 3 / 128150 1 / 170663     3 / 128150 1 / 170663 0 / 159917 0 / 159059
lymph node     12 / 5278419 7 / 4863489 0 / 62650 0 / 27007 12 / 5278419 7 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 3 / 46553 3 / 104307 8 / 43166038 35 / 30312656 3 / 46553 3 / 104307 8 / 43166038 35 / 30312656
muscle 5 / 74039       5 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988 1 / 94887   0 / 11462 3 / 89988 1 / 94887 0 / 179472
pancreas   1 / 74930   1 / 189999 0 / 7237 1 / 74930 0 / 85728 1 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system   1 / 645 -- -- 0 / 14891 1 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 7 / 241088   3 / 207348 -- 7 / 241088 0 / 39531 3 / 207348 --
pooled tissue 4 / 276455   -- -- 4 / 276455 0 / 0 -- --
prostate 1 / 79993 3 / 107080 4 / 266949 2 / 491794 1 / 79993 3 / 107080 4 / 266949 2 / 491794
retina   -- 9 / 820326   0 / 29438 -- 9 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   3 / 125377 87 / 26905847 156 / 34522313 0 / 73633 3 / 125377 87 / 26905847 156 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 7 / 6230144 -- -- -- 7 / 6230144 --
stomach   3 / 65644   1 / 448716 0 / 26641 3 / 65644 0 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 6 / 143630 10 / 100058 -- 129 / 12372003 6 / 143630 10 / 100058 -- 129 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid         0 / 11737 0 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 2 / 207932 6 / 479819     2 / 207932 6 / 479819 0 / 21833 0 / 51729
uterus   2 / 133582 12 / 10193077 -- 0 / 38063 2 / 133582 12 / 10193077 --
vascular 3 / 46250 -- 24 / 13135050 -- 3 / 46250 -- 24 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --