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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.22960Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 164 / 3316537 164 / 2498449 390 / 114162531 768 / 109592465 164 / 3316537 164 / 2498449 390 / 114162531 768 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   6 / 57865 --   0 / 16077 6 / 57865 -- 0 / 83577
bone marrow 3 / 14774 15 / 29891 59 / 5047110 27 / 4978364 3 / 14774 15 / 29891 59 / 5047110 27 / 4978364
brain 26 / 506301 17 / 200215 6 / 729526 154 / 4997811 26 / 506301 17 / 200215 6 / 729526 154 / 4997811
cartilage   2 / 37226 -- 12 / 778035 0 / 15965 2 / 37226 -- 12 / 778035
cerebellum 3 / 90353   2 / 90885 66 / 1495938 3 / 90353 0 / 0 2 / 90885 66 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 2 / 26551 4 / 151167 1 / 98089 2 / 643586 2 / 26551 4 / 151167 1 / 98089 2 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 16 / 246043   -- -- 16 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 8 / 128826 1 / 46440 3 / 85898 21 / 12434232 8 / 128826 1 / 46440 3 / 85898 21 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart 2 / 76442   2 / 83063 -- 2 / 76442 0 / 1 2 / 83063 --
kidney 12 / 106627 1 / 89898 7 / 155372   12 / 106627 1 / 89898 7 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 12 / 96846 9 / 107249 1 / 66308 9 / 214987 12 / 96846 9 / 107249 1 / 66308 9 / 214987
lung 10 / 128150 6 / 170663 6 / 159917 3 / 159059 10 / 128150 6 / 170663 6 / 159917 3 / 159059
lymph node 5 / 62650   25 / 5278419 25 / 4863489 5 / 62650 0 / 27007 25 / 5278419 25 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland   5 / 104307 38 / 43166038 150 / 30312656 0 / 46553 5 / 104307 38 / 43166038 150 / 30312656
muscle 2 / 74039     1 / 61270 2 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462   1 / 94887 5 / 179472 1 / 11462 0 / 89988 1 / 94887 5 / 179472
pancreas       6 / 189999 0 / 7237 0 / 74930 0 / 85728 6 / 189999
pancreatic islet 3 / 96524 3 / 30072 -- -- 3 / 96524 3 / 30072 -- --
parathyroid   6 / 20557 -- -- 0 / 24 6 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 4 / 241088 3 / 39531 3 / 207348 -- 4 / 241088 3 / 39531 3 / 207348 --
pooled tissue 14 / 276455   -- -- 14 / 276455 0 / 0 -- --
prostate 6 / 79993 10 / 107080 4 / 266949 20 / 491794 6 / 79993 10 / 107080 4 / 266949 20 / 491794
retina   -- 33 / 820326   0 / 29438 -- 33 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   11 / 125377 99 / 26905847 117 / 34522313 0 / 73633 11 / 125377 99 / 26905847 117 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 25 / 6230144 -- -- -- 25 / 6230144 --
stomach 2 / 26641 4 / 65644 4 / 124767 18 / 448716 2 / 26641 4 / 65644 4 / 124767 18 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 10 / 100058 -- 126 / 12372003 7 / 143630 10 / 100058 -- 126 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     8 / 115938 3 / 124664 0 / 11737 0 / 32606 8 / 115938 3 / 124664
uncharacterized tissue 16 / 207932 41 / 479819   3 / 51729 16 / 207932 41 / 479819 0 / 21833 3 / 51729
uterus 2 / 38063 7 / 133582 33 / 10193077 -- 2 / 38063 7 / 133582 33 / 10193077 --
vascular 1 / 46250 -- 27 / 13135050 -- 1 / 46250 -- 27 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --