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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.227729Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 129 / 3316537 83 / 2498449 3988 / 114162531 3524 / 109592465 129 / 3316537 83 / 2498449 3988 / 114162531 3524 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 -- 13 / 83577 0 / 16077 1 / 57865 -- 13 / 83577
bone marrow     26 / 5047110 74 / 4978364 0 / 14774 0 / 29891 26 / 5047110 74 / 4978364
brain 5 / 506301 8 / 200215 39 / 729526 214 / 4997811 5 / 506301 8 / 200215 39 / 729526 214 / 4997811
cartilage   3 / 37226 -- 77 / 778035 0 / 15965 3 / 37226 -- 77 / 778035
cerebellum     1 / 90885 23 / 1495938 0 / 90353 0 / 0 1 / 90885 23 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix 1 / 3888   -- -- 1 / 3888 0 / 44577 -- --
colon 5 / 26551 10 / 151167 12 / 98089 65 / 643586 5 / 26551 10 / 151167 12 / 98089 65 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 4 / 246043   -- -- 4 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 14 / 128826   9 / 85898 418 / 12434232 14 / 128826 0 / 46440 9 / 85898 418 / 12434232
gastrointestinal tract     3 / 45908 -- 0 / 28803 0 / 12721 3 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 5 / 106627 9 / 89898 12 / 155372 6 / 100281 5 / 106627 9 / 89898 12 / 155372 6 / 100281
limb -- -- -- -- -- -- -- --
liver   1 / 107249   3 / 214987 0 / 96846 1 / 107249 0 / 66308 3 / 214987
lung 5 / 128150 8 / 170663 7 / 159917 37 / 159059 5 / 128150 8 / 170663 7 / 159917 37 / 159059
lymph node 2 / 62650   92 / 5278419 10 / 4863489 2 / 62650 0 / 27007 92 / 5278419 10 / 4863489
lymphoreticular 1 / 17836   -- -- 1 / 17836 0 / 44303 -- --
mammary gland   6 / 104307 1446 / 43166038 1093 / 30312656 0 / 46553 6 / 104307 1446 / 43166038 1093 / 30312656
muscle 4 / 74039   6 / 107836 1 / 61270 4 / 74039 0 / 27691 6 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   2 / 89988 6 / 94887 21 / 179472 0 / 11462 2 / 89988 6 / 94887 21 / 179472
pancreas 1 / 7237 4 / 74930 13 / 85728 35 / 189999 1 / 7237 4 / 74930 13 / 85728 35 / 189999
pancreatic islet 8 / 96524   -- -- 8 / 96524 0 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 5 / 13260   -- -- 5 / 13260 0 / 1358 -- --
placenta 10 / 241088 5 / 39531 9 / 207348 -- 10 / 241088 5 / 39531 9 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 24 / 79993 3 / 107080 16 / 266949 65 / 491794 24 / 79993 3 / 107080 16 / 266949 65 / 491794
retina 4 / 29438 -- 30 / 820326 2 / 88490 4 / 29438 -- 30 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 7 / 73633 3 / 125377 836 / 26905847 1028 / 34522313 7 / 73633 3 / 125377 836 / 26905847 1028 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 302 / 6230144 -- -- -- 302 / 6230144 --
stomach   3 / 65644 4 / 124767 22 / 448716 0 / 26641 3 / 65644 4 / 124767 22 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630 1 / 100058 -- 304 / 12372003 4 / 143630 1 / 100058 -- 304 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 4 / 115938 9 / 124664 0 / 11737 1 / 32606 4 / 115938 9 / 124664
uncharacterized tissue 3 / 207932 11 / 479819 1 / 21833 4 / 51729 3 / 207932 11 / 479819 1 / 21833 4 / 51729
uterus 3 / 38063 1 / 133582 356 / 10193077 -- 3 / 38063 1 / 133582 356 / 10193077 --
vascular 1 / 46250 -- 693 / 13135050 -- 1 / 46250 -- 693 / 13135050 --
white blood cells -- -- 65 / 846268 -- -- -- 65 / 846268 --
whole body -- -- -- -- -- -- -- --