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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.20000Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 102 / 3316537 87 / 2498449 641 / 114162531 962 / 109592465 102 / 3316537 87 / 2498449 641 / 114162531 962 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 5 / 57865 --   1 / 16077 5 / 57865 -- 0 / 83577
bone marrow   5 / 29891 4 / 5047110 12 / 4978364 0 / 14774 5 / 29891 4 / 5047110 12 / 4978364
brain 7 / 506301 5 / 200215   47 / 4997811 7 / 506301 5 / 200215 0 / 729526 47 / 4997811
cartilage   2 / 37226 -- 6 / 778035 0 / 15965 2 / 37226 -- 6 / 778035
cerebellum 1 / 90353   1 / 90885 17 / 1495938 1 / 90353 0 / 0 1 / 90885 17 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix 1 / 3888   -- -- 1 / 3888 0 / 44577 -- --
colon   7 / 151167   3 / 643586 0 / 26551 7 / 151167 0 / 98089 3 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 5 / 246043   -- -- 5 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 3 / 128826 2 / 46440   210 / 12434232 3 / 128826 2 / 46440 0 / 85898 210 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627 1 / 89898 2 / 155372   1 / 106627 1 / 89898 2 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver   3 / 107249     0 / 96846 3 / 107249 0 / 66308 0 / 214987
lung 4 / 128150 3 / 170663   1 / 159059 4 / 128150 3 / 170663 0 / 159917 1 / 159059
lymph node 13 / 62650 4 / 27007 42 / 5278419 17 / 4863489 13 / 62650 4 / 27007 42 / 5278419 17 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland   6 / 104307 78 / 43166038 233 / 30312656 0 / 46553 6 / 104307 78 / 43166038 233 / 30312656
muscle 3 / 74039       3 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     2 / 94887 3 / 179472 0 / 11462 0 / 89988 2 / 94887 3 / 179472
pancreas   1 / 74930     0 / 7237 1 / 74930 0 / 85728 0 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 9 / 241088 4 / 39531 4 / 207348 -- 9 / 241088 4 / 39531 4 / 207348 --
pooled tissue 16 / 276455   -- -- 16 / 276455 0 / 0 -- --
prostate 1 / 79993 3 / 107080 2 / 266949   1 / 79993 3 / 107080 2 / 266949 0 / 491794
retina   -- 7 / 820326   0 / 29438 -- 7 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633 3 / 125377 123 / 26905847 283 / 34522313 2 / 73633 3 / 125377 123 / 26905847 283 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 96 / 6230144 -- -- -- 96 / 6230144 --
stomach   6 / 65644 1 / 124767 3 / 448716 0 / 26641 6 / 65644 1 / 124767 3 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 14 / 143630 1 / 100058 -- 126 / 12372003 14 / 143630 1 / 100058 -- 126 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid       1 / 124664 0 / 11737 0 / 32606 0 / 115938 1 / 124664
uncharacterized tissue 6 / 207932 20 / 479819     6 / 207932 20 / 479819 0 / 21833 0 / 51729
uterus 5 / 38063 6 / 133582 70 / 10193077 -- 5 / 38063 6 / 133582 70 / 10193077 --
vascular 3 / 46250 -- 205 / 13135050 -- 3 / 46250 -- 205 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --