Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.186486Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 79 / 3316537 44 / 2498449 1692 / 114162531 1191 / 109592465 79 / 3316537 44 / 2498449 1692 / 114162531 1191 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 1 / 57865 -- 1 / 83577 1 / 16077 1 / 57865 -- 1 / 83577
bone marrow   2 / 29891 2 / 5047110 24 / 4978364 0 / 14774 2 / 29891 2 / 5047110 24 / 4978364
brain 13 / 506301   15 / 729526 151 / 4997811 13 / 506301 0 / 200215 15 / 729526 151 / 4997811
cartilage 2 / 15965   -- 8 / 778035 2 / 15965 0 / 37226 -- 8 / 778035
cerebellum 5 / 90353   2 / 90885 27 / 1495938 5 / 90353 0 / 0 2 / 90885 27 / 1495938
cerebrum 9 / 198932   -- -- 9 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   1 / 151167 2 / 98089 5 / 643586 0 / 26551 1 / 151167 2 / 98089 5 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 5 / 128826     146 / 12434232 5 / 128826 0 / 46440 0 / 85898 146 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 2 / 76442   1 / 83063 -- 2 / 76442 0 / 1 1 / 83063 --
kidney 2 / 106627   2 / 155372   2 / 106627 0 / 89898 2 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 3 / 107249   1 / 214987 2 / 96846 3 / 107249 0 / 66308 1 / 214987
lung 2 / 128150 9 / 170663 1 / 159917 3 / 159059 2 / 128150 9 / 170663 1 / 159917 3 / 159059
lymph node 2 / 62650 8 / 27007 49 / 5278419 5 / 4863489 2 / 62650 8 / 27007 49 / 5278419 5 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland   2 / 104307 95 / 43166038 468 / 30312656 0 / 46553 2 / 104307 95 / 43166038 468 / 30312656
muscle 3 / 74039       3 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   3 / 89988 1 / 94887 1 / 179472 0 / 11462 3 / 89988 1 / 94887 1 / 179472
pancreas 1 / 7237 1 / 74930   5 / 189999 1 / 7237 1 / 74930 0 / 85728 5 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta     3 / 207348 -- 0 / 241088 0 / 39531 3 / 207348 --
pooled tissue 6 / 276455   -- -- 6 / 276455 0 / 0 -- --
prostate 5 / 79993   1 / 266949 6 / 491794 5 / 79993 0 / 107080 1 / 266949 6 / 491794
retina 3 / 29438 -- 11 / 820326   3 / 29438 -- 11 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin     373 / 26905847 310 / 34522313 0 / 73633 0 / 125377 373 / 26905847 310 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 9 / 6230144 -- -- -- 9 / 6230144 --
stomach   3 / 65644 7 / 124767 18 / 448716 0 / 26641 3 / 65644 7 / 124767 18 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630   -- 10 / 12372003 4 / 143630 0 / 100058 -- 10 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   3 / 32606 6 / 115938 2 / 124664 0 / 11737 3 / 32606 6 / 115938 2 / 124664
uncharacterized tissue 1 / 207932 5 / 479819     1 / 207932 5 / 479819 0 / 21833 0 / 51729
uterus 2 / 38063 2 / 133582 964 / 10193077 -- 2 / 38063 2 / 133582 964 / 10193077 --
vascular   -- 137 / 13135050 -- 0 / 46250 -- 137 / 13135050 --
white blood cells -- -- 11 / 846268 -- -- -- 11 / 846268 --
whole body -- -- -- -- -- -- -- --