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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.180711Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 200 / 3316537 180 / 2498449 1983 / 114162531 3764 / 109592465 200 / 3316537 180 / 2498449 1983 / 114162531 3764 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   4 / 57865 --   0 / 16077 4 / 57865 -- 0 / 83577
bone marrow     124 / 5047110 51 / 4978364 0 / 14774 0 / 29891 124 / 5047110 51 / 4978364
brain 25 / 506301   16 / 729526 66 / 4997811 25 / 506301 0 / 200215 16 / 729526 66 / 4997811
cartilage   1 / 37226 -- 19 / 778035 0 / 15965 1 / 37226 -- 19 / 778035
cerebellum 4 / 90353   2 / 90885 61 / 1495938 4 / 90353 0 / 0 2 / 90885 61 / 1495938
cerebrum 8 / 198932   -- -- 8 / 198932 0 / 3422 -- --
cervix   2 / 44577 -- -- 0 / 3888 2 / 44577 -- --
colon 2 / 26551 21 / 151167 2 / 98089 11 / 643586 2 / 26551 21 / 151167 2 / 98089 11 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 15 / 246043   -- -- 15 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 16 / 128826 7 / 46440 1 / 85898 1169 / 12434232 16 / 128826 7 / 46440 1 / 85898 1169 / 12434232
gastrointestinal tract 1 / 28803   1 / 45908 -- 1 / 28803 0 / 12721 1 / 45908 --
heart 6 / 76442   1 / 83063 -- 6 / 76442 0 / 1 1 / 83063 --
kidney 13 / 106627 7 / 89898 5 / 155372 2 / 100281 13 / 106627 7 / 89898 5 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 3 / 107249   2 / 214987 2 / 96846 3 / 107249 0 / 66308 2 / 214987
lung 10 / 128150 19 / 170663 6 / 159917 8 / 159059 10 / 128150 19 / 170663 6 / 159917 8 / 159059
lymph node     43 / 5278419 19 / 4863489 0 / 62650 0 / 27007 43 / 5278419 19 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 4 / 46553 12 / 104307 693 / 43166038 1132 / 30312656 4 / 46553 12 / 104307 693 / 43166038 1132 / 30312656
muscle   3 / 27691     0 / 74039 3 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   3 / 89988 1 / 94887 6 / 179472 0 / 11462 3 / 89988 1 / 94887 6 / 179472
pancreas   6 / 74930 4 / 85728 5 / 189999 0 / 7237 6 / 74930 4 / 85728 5 / 189999
pancreatic islet 8 / 96524 3 / 30072 -- -- 8 / 96524 3 / 30072 -- --
parathyroid   6 / 20557 -- -- 0 / 24 6 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland 3 / 6170 -- -- -- 3 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 26 / 241088 3 / 39531 17 / 207348 -- 26 / 241088 3 / 39531 17 / 207348 --
pooled tissue 15 / 276455   -- -- 15 / 276455 0 / 0 -- --
prostate 3 / 79993 3 / 107080 3 / 266949 11 / 491794 3 / 79993 3 / 107080 3 / 266949 11 / 491794
retina 3 / 29438 -- 12 / 820326 31 / 88490 3 / 29438 -- 12 / 820326 31 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 10 / 73633 20 / 125377 303 / 26905847 680 / 34522313 10 / 73633 20 / 125377 303 / 26905847 680 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 219 / 6230144 -- -- -- 219 / 6230144 --
stomach 1 / 26641 16 / 65644 9 / 124767 15 / 448716 1 / 26641 16 / 65644 9 / 124767 15 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 10 / 143630 14 / 100058 -- 469 / 12372003 10 / 143630 14 / 100058 -- 469 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606 4 / 115938 5 / 124664 0 / 11737 2 / 32606 4 / 115938 5 / 124664
uncharacterized tissue 8 / 207932 21 / 479819 2 / 21833 2 / 51729 8 / 207932 21 / 479819 2 / 21833 2 / 51729
uterus 3 / 38063 4 / 133582 204 / 10193077 -- 3 / 38063 4 / 133582 204 / 10193077 --
vascular 2 / 46250 -- 282 / 13135050 -- 2 / 46250 -- 282 / 13135050 --
white blood cells -- -- 29 / 846268 -- -- -- 29 / 846268 --
whole body -- -- -- -- -- -- -- --