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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.170009Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 66 / 3316537 49 / 2498449 1188 / 114162531 1562 / 109592465 66 / 3316537 49 / 2498449 1188 / 114162531 1562 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow   1 / 29891 5 / 5047110 2 / 4978364 0 / 14774 1 / 29891 5 / 5047110 2 / 4978364
brain 24 / 506301   15 / 729526 37 / 4997811 24 / 506301 0 / 200215 15 / 729526 37 / 4997811
cartilage     -- 1 / 778035 0 / 15965 0 / 37226 -- 1 / 778035
cerebellum 2 / 90353     17 / 1495938 2 / 90353 0 / 0 0 / 90885 17 / 1495938
cerebrum 12 / 198932 2 / 3422 -- -- 12 / 198932 2 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   3 / 151167   3 / 643586 0 / 26551 3 / 151167 0 / 98089 3 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 2 / 246043   -- -- 2 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 2 / 128826     98 / 12434232 2 / 128826 0 / 46440 0 / 85898 98 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 2 / 106627 8 / 89898 1 / 155372   2 / 106627 8 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver     1 / 66308 2 / 214987 0 / 96846 0 / 107249 1 / 66308 2 / 214987
lung   2 / 170663 3 / 159917   0 / 128150 2 / 170663 3 / 159917 0 / 159059
lymph node     28 / 5278419 22 / 4863489 0 / 62650 0 / 27007 28 / 5278419 22 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 3 / 46553   93 / 43166038 212 / 30312656 3 / 46553 0 / 104307 93 / 43166038 212 / 30312656
muscle 2 / 74039       2 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     1 / 94887 2 / 179472 0 / 11462 0 / 89988 1 / 94887 2 / 179472
pancreas 1 / 7237     3 / 189999 1 / 7237 0 / 74930 0 / 85728 3 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta     4 / 207348 -- 0 / 241088 0 / 39531 4 / 207348 --
pooled tissue 2 / 276455   -- -- 2 / 276455 0 / 0 -- --
prostate     3 / 266949 1 / 491794 0 / 79993 0 / 107080 3 / 266949 1 / 491794
retina 2 / 29438 -- 9 / 820326 2 / 88490 2 / 29438 -- 9 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 5 / 125377 706 / 26905847 1099 / 34522313 4 / 73633 5 / 125377 706 / 26905847 1099 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 74 / 6230144 -- -- -- 74 / 6230144 --
stomach   2 / 65644   5 / 448716 0 / 26641 2 / 65644 0 / 124767 5 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 1 / 143630   -- 55 / 12372003 1 / 143630 0 / 100058 -- 55 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   7 / 32606 3 / 115938 1 / 124664 0 / 11737 7 / 32606 3 / 115938 1 / 124664
uncharacterized tissue 1 / 207932 17 / 479819     1 / 207932 17 / 479819 0 / 21833 0 / 51729
uterus   1 / 133582 144 / 10193077 -- 0 / 38063 1 / 133582 144 / 10193077 --
vascular   -- 94 / 13135050 -- 0 / 46250 -- 94 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --