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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.162125Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 52 / 3316537 49 / 2498449 4777 / 114162531 1888 / 109592465 52 / 3316537 49 / 2498449 4777 / 114162531 1888 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 -- 1 / 83577 0 / 16077 1 / 57865 -- 1 / 83577
bone marrow     106 / 5047110 134 / 4978364 0 / 14774 0 / 29891 106 / 5047110 134 / 4978364
brain 3 / 506301 13 / 200215 18 / 729526 57 / 4997811 3 / 506301 13 / 200215 18 / 729526 57 / 4997811
cartilage 2 / 15965 1 / 37226 -- 12 / 778035 2 / 15965 1 / 37226 -- 12 / 778035
cerebellum     1 / 90885 5 / 1495938 0 / 90353 0 / 0 1 / 90885 5 / 1495938
cerebrum 4 / 198932 1 / 3422 -- -- 4 / 198932 1 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon     13 / 98089 26 / 643586 0 / 26551 0 / 151167 13 / 98089 26 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 3 / 246043   -- -- 3 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826     136 / 12434232 4 / 128826 0 / 46440 0 / 85898 136 / 12434232
gastrointestinal tract     4 / 45908 -- 0 / 28803 0 / 12721 4 / 45908 --
heart 2 / 76442     -- 2 / 76442 0 / 1 0 / 83063 --
kidney 5 / 106627 2 / 89898 2 / 155372 1 / 100281 5 / 106627 2 / 89898 2 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver   1 / 107249     0 / 96846 1 / 107249 0 / 66308 0 / 214987
lung 9 / 128150 2 / 170663   1 / 159059 9 / 128150 2 / 170663 0 / 159917 1 / 159059
lymph node     31 / 5278419 7 / 4863489 0 / 62650 0 / 27007 31 / 5278419 7 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 2 / 46553   3291 / 43166038 740 / 30312656 2 / 46553 0 / 104307 3291 / 43166038 740 / 30312656
muscle     2 / 107836 2 / 61270 0 / 74039 0 / 27691 2 / 107836 2 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   4 / 89988 1 / 94887 4 / 179472 0 / 11462 4 / 89988 1 / 94887 4 / 179472
pancreas   3 / 74930 1 / 85728 7 / 189999 0 / 7237 3 / 74930 1 / 85728 7 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 1 / 241088     -- 1 / 241088 0 / 39531 0 / 207348 --
pooled tissue 8 / 276455   -- -- 8 / 276455 0 / 0 -- --
prostate 4 / 79993   2 / 266949 7 / 491794 4 / 79993 0 / 107080 2 / 266949 7 / 491794
retina   -- 9 / 820326 1 / 88490 0 / 29438 -- 9 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633   648 / 26905847 427 / 34522313 1 / 73633 0 / 125377 648 / 26905847 427 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 120 / 6230144 -- -- -- 120 / 6230144 --
stomach   1 / 65644 2 / 124767 10 / 448716 0 / 26641 1 / 65644 2 / 124767 10 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630 7 / 100058 -- 309 / 12372003 2 / 143630 7 / 100058 -- 309 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606   1 / 124664 0 / 11737 2 / 32606 0 / 115938 1 / 124664
uncharacterized tissue   5 / 479819 1 / 21833   0 / 207932 5 / 479819 1 / 21833 0 / 51729
uterus   4 / 133582 135 / 10193077 -- 0 / 38063 4 / 133582 135 / 10193077 --
vascular   -- 365 / 13135050 -- 0 / 46250 -- 365 / 13135050 --
white blood cells -- -- 25 / 846268 -- -- -- 25 / 846268 --
whole body -- -- -- -- -- -- -- --