Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.149443Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 82 / 3316537 78 / 2498449 1281 / 114162531 2535 / 109592465 82 / 3316537 78 / 2498449 1281 / 114162531 2535 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 -- 1 / 83577 0 / 16077 1 / 57865 -- 1 / 83577
bone marrow     18 / 5047110 3 / 4978364 0 / 14774 0 / 29891 18 / 5047110 3 / 4978364
brain 10 / 506301 12 / 200215 2 / 729526 90 / 4997811 10 / 506301 12 / 200215 2 / 729526 90 / 4997811
cartilage   3 / 37226 -- 6 / 778035 0 / 15965 3 / 37226 -- 6 / 778035
cerebellum       22 / 1495938 0 / 90353 0 / 0 0 / 90885 22 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   10 / 151167 3 / 98089 22 / 643586 0 / 26551 10 / 151167 3 / 98089 22 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 6 / 246043   -- -- 6 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 8 / 128826     314 / 12434232 8 / 128826 0 / 46440 0 / 85898 314 / 12434232
gastrointestinal tract     2 / 45908 -- 0 / 28803 0 / 12721 2 / 45908 --
heart     1 / 83063 -- 0 / 76442 0 / 1 1 / 83063 --
kidney 10 / 106627 2 / 89898 4 / 155372 3 / 100281 10 / 106627 2 / 89898 4 / 155372 3 / 100281
limb -- -- -- -- -- -- -- --
liver   5 / 107249 3 / 66308 1 / 214987 0 / 96846 5 / 107249 3 / 66308 1 / 214987
lung 4 / 128150 4 / 170663 3 / 159917 9 / 159059 4 / 128150 4 / 170663 3 / 159917 9 / 159059
lymph node 5 / 62650 1 / 27007 64 / 5278419 18 / 4863489 5 / 62650 1 / 27007 64 / 5278419 18 / 4863489
lymphoreticular 1 / 17836   -- -- 1 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 1 / 104307 167 / 43166038 1137 / 30312656 1 / 46553 1 / 104307 167 / 43166038 1137 / 30312656
muscle 1 / 74039   1 / 107836   1 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   6 / 89988 2 / 94887 4 / 179472 0 / 11462 6 / 89988 2 / 94887 4 / 179472
pancreas   6 / 74930   4 / 189999 0 / 7237 6 / 74930 0 / 85728 4 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 6 / 241088 1 / 39531 5 / 207348 -- 6 / 241088 1 / 39531 5 / 207348 --
pooled tissue 12 / 276455   -- -- 12 / 276455 0 / 0 -- --
prostate 1 / 79993   2 / 266949 12 / 491794 1 / 79993 0 / 107080 2 / 266949 12 / 491794
retina   -- 4 / 820326 2 / 88490 0 / 29438 -- 4 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633 5 / 125377 501 / 26905847 780 / 34522313 3 / 73633 5 / 125377 501 / 26905847 780 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 116 / 6230144 -- -- -- 116 / 6230144 --
stomach   4 / 65644 1 / 124767 12 / 448716 0 / 26641 4 / 65644 1 / 124767 12 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 3 / 100058 -- 92 / 12372003 7 / 143630 3 / 100058 -- 92 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     5 / 115938 3 / 124664 0 / 11737 0 / 32606 5 / 115938 3 / 124664
uncharacterized tissue 4 / 207932 11 / 479819     4 / 207932 11 / 479819 0 / 21833 0 / 51729
uterus   2 / 133582 76 / 10193077 -- 0 / 38063 2 / 133582 76 / 10193077 --
vascular   -- 237 / 13135050 -- 0 / 46250 -- 237 / 13135050 --
white blood cells -- -- 64 / 846268 -- -- -- 64 / 846268 --
whole body -- -- -- -- -- -- -- --