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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.132499Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 173 / 3316537 144 / 2498449 1979 / 114162531 1985 / 109592465 173 / 3316537 144 / 2498449 1979 / 114162531 1985 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 -- 3 / 83577 0 / 16077 1 / 57865 -- 3 / 83577
bone marrow 2 / 14774   20 / 5047110 65 / 4978364 2 / 14774 0 / 29891 20 / 5047110 65 / 4978364
brain 6 / 506301 14 / 200215 13 / 729526 85 / 4997811 6 / 506301 14 / 200215 13 / 729526 85 / 4997811
cartilage     -- 7 / 778035 0 / 15965 0 / 37226 -- 7 / 778035
cerebellum 2 / 90353     20 / 1495938 2 / 90353 0 / 0 0 / 90885 20 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix   4 / 44577 -- -- 0 / 3888 4 / 44577 -- --
colon   9 / 151167 2 / 98089 14 / 643586 0 / 26551 9 / 151167 2 / 98089 14 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 19 / 246043   -- -- 19 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 20 / 128826 2 / 46440 1 / 85898 203 / 12434232 20 / 128826 2 / 46440 1 / 85898 203 / 12434232
gastrointestinal tract     2 / 45908 -- 0 / 28803 0 / 12721 2 / 45908 --
heart 6 / 76442     -- 6 / 76442 0 / 1 0 / 83063 --
kidney 2 / 106627 4 / 89898 5 / 155372 6 / 100281 2 / 106627 4 / 89898 5 / 155372 6 / 100281
limb -- -- -- -- -- -- -- --
liver 7 / 96846 3 / 107249   2 / 214987 7 / 96846 3 / 107249 0 / 66308 2 / 214987
lung 12 / 128150 21 / 170663 2 / 159917 2 / 159059 12 / 128150 21 / 170663 2 / 159917 2 / 159059
lymph node 5 / 62650 3 / 27007 330 / 5278419 76 / 4863489 5 / 62650 3 / 27007 330 / 5278419 76 / 4863489
lymphoreticular 4 / 17836 4 / 44303 -- -- 4 / 17836 4 / 44303 -- --
mammary gland 3 / 46553 1 / 104307 522 / 43166038 495 / 30312656 3 / 46553 1 / 104307 522 / 43166038 495 / 30312656
muscle 5 / 74039 2 / 27691 1 / 107836   5 / 74039 2 / 27691 1 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 8 / 89988 2 / 94887 9 / 179472 1 / 11462 8 / 89988 2 / 94887 9 / 179472
pancreas 2 / 7237 6 / 74930 1 / 85728 5 / 189999 2 / 7237 6 / 74930 1 / 85728 5 / 189999
pancreatic islet 4 / 96524 4 / 30072 -- -- 4 / 96524 4 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 11 / 241088 5 / 39531 4 / 207348 -- 11 / 241088 5 / 39531 4 / 207348 --
pooled tissue 13 / 276455   -- -- 13 / 276455 0 / 0 -- --
prostate 5 / 79993 7 / 107080 12 / 266949 18 / 491794 5 / 79993 7 / 107080 12 / 266949 18 / 491794
retina 1 / 29438 -- 3 / 820326   1 / 29438 -- 3 / 820326 0 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 8 / 73633 8 / 125377 457 / 26905847 447 / 34522313 8 / 73633 8 / 125377 457 / 26905847 447 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 162 / 6230144 -- -- -- 162 / 6230144 --
stomach 1 / 26641 1 / 65644 1 / 124767 9 / 448716 1 / 26641 1 / 65644 1 / 124767 9 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 5 / 143630   -- 516 / 12372003 5 / 143630 0 / 100058 -- 516 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid 2 / 11737     3 / 124664 2 / 11737 0 / 32606 0 / 115938 3 / 124664
uncharacterized tissue 11 / 207932 27 / 479819     11 / 207932 27 / 479819 0 / 21833 0 / 51729
uterus 3 / 38063 7 / 133582 83 / 10193077 -- 3 / 38063 7 / 133582 83 / 10193077 --
vascular 2 / 46250 -- 348 / 13135050 -- 2 / 46250 -- 348 / 13135050 --
white blood cells -- -- 8 / 846268 -- -- -- 8 / 846268 --
whole body -- -- -- -- -- -- -- --