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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.105956Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 91 / 3316537 60 / 2498449 5150 / 114162531 10036 / 109592465 91 / 3316537 60 / 2498449 5150 / 114162531 10036 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 --   0 / 16077 3 / 57865 -- 0 / 83577
bone marrow     58 / 5047110 61 / 4978364 0 / 14774 0 / 29891 58 / 5047110 61 / 4978364
brain 11 / 506301 3 / 200215 16 / 729526 265 / 4997811 11 / 506301 3 / 200215 16 / 729526 265 / 4997811
cartilage   1 / 37226 -- 33 / 778035 0 / 15965 1 / 37226 -- 33 / 778035
cerebellum 2 / 90353   4 / 90885 156 / 1495938 2 / 90353 0 / 0 4 / 90885 156 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix 1 / 3888 1 / 44577 -- -- 1 / 3888 1 / 44577 -- --
colon   1 / 151167 2 / 98089 30 / 643586 0 / 26551 1 / 151167 2 / 98089 30 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 2 / 246043   -- -- 2 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 3 / 128826   7 / 85898 996 / 12434232 3 / 128826 0 / 46440 7 / 85898 996 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721 3 / 45908 -- 1 / 28803 1 / 12721 3 / 45908 --
heart 4 / 76442   1 / 83063 -- 4 / 76442 0 / 1 1 / 83063 --
kidney     32 / 155372 1 / 100281 0 / 106627 0 / 89898 32 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 2 / 107249   9 / 214987 1 / 96846 2 / 107249 0 / 66308 9 / 214987
lung 2 / 128150 2 / 170663 5 / 159917 1 / 159059 2 / 128150 2 / 170663 5 / 159917 1 / 159059
lymph node 5 / 62650   194 / 5278419 787 / 4863489 5 / 62650 0 / 27007 194 / 5278419 787 / 4863489
lymphoreticular 2 / 17836 4 / 44303 -- -- 2 / 17836 4 / 44303 -- --
mammary gland   5 / 104307 597 / 43166038 1216 / 30312656 0 / 46553 5 / 104307 597 / 43166038 1216 / 30312656
muscle   3 / 27691   2 / 61270 0 / 74039 3 / 27691 0 / 107836 2 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462   1 / 94887 10 / 179472 1 / 11462 0 / 89988 1 / 94887 10 / 179472
pancreas   1 / 74930 2 / 85728 5 / 189999 0 / 7237 1 / 74930 2 / 85728 5 / 189999
pancreatic islet 7 / 96524   -- -- 7 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 3 / 241088 3 / 39531 9 / 207348 -- 3 / 241088 3 / 39531 9 / 207348 --
pooled tissue 3 / 276455   -- -- 3 / 276455 0 / 0 -- --
prostate 12 / 79993   11 / 266949 25 / 491794 12 / 79993 0 / 107080 11 / 266949 25 / 491794
retina   -- 47 / 820326 5 / 88490 0 / 29438 -- 47 / 820326 5 / 88490
salivary gland   2 / 10368 -- -- 0 / 2490 2 / 10368 -- --
skin 2 / 73633 5 / 125377 1054 / 26905847 3078 / 34522313 2 / 73633 5 / 125377 1054 / 26905847 3078 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 11 / 52939   -- -- 11 / 52939 0 / 5 -- --
stem cell -- -- 1048 / 6230144 -- -- -- 1048 / 6230144 --
stomach 1 / 26641   6 / 124767 29 / 448716 1 / 26641 0 / 65644 6 / 124767 29 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630   -- 3315 / 12372003 2 / 143630 0 / 100058 -- 3315 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     3 / 115938 5 / 124664 0 / 11737 0 / 32606 3 / 115938 5 / 124664
uncharacterized tissue 5 / 207932 17 / 479819   7 / 51729 5 / 207932 17 / 479819 0 / 21833 7 / 51729
uterus   4 / 133582 459 / 10193077 -- 0 / 38063 4 / 133582 459 / 10193077 --
vascular 4 / 46250 -- 1581 / 13135050 -- 4 / 46250 -- 1581 / 13135050 --
white blood cells -- -- 10 / 846268 -- -- -- 10 / 846268 --
whole body -- -- -- -- -- -- -- --