Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Library List

Libraries for cluster Mm.258142

[Full Text]
Displaying 1 thru 87 of 87 items
TitleTissueHistologyTypeProtocolKeywords
NIH_BMAP_EQ0brainnormalbulknon-normalizedfetus, normal, non-normalized, BMAP, bulk, EST, Soares non-normalized, MGC, size fractionated, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6, whole brain
NIH_BMAP_EV0brainnormalbulknon-normalizedfetus, normal, non-normalized, BMAP, bulk, EST, Soares non-normalized, MGC, size fractionated, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6, whole brain
RIKEN full-length enriched, adult male brainbrainnormalbulkuncharacterized treatmentnormal, bulk, adult, full-length enriched, EST, male, C57BL/6J, whole brain
RIKEN full-length enriched, adult male diencephalonbrainnormalbulkmultiple treatmentnormal, bulk, adult, normalized, subtracted, diencephalon, full-length enriched, EST, male, C57BL/6J
RIKEN full-length enriched, 16 days neonate cerebellumcerebellumnormalbulkmultiple treatmentnormal, cerebellum, bulk, normalized, subtracted, juvenile, full-length enriched, EST
RIKEN full-length enriched, adult male cerebellumcerebellumnormalbulkuncharacterized treatmentnormal, cerebellum, bulk, adult, full-length enriched, EST, male, C57BL/6J
Mouse Neurosphere Normalized cDNA librarycerebrumnormalcell linenormalizednormal, cell line, adult, normalized, EST, neurosphere, mixed pool by gender, plasmid vector, lateral ventricle wall, C57BL/6
NIH_BMAP_MAM_Ncerebrumnormalbulknormalizednormal, BMAP, amygdala, bulk, normalized, juvenile, EST, Soares normalized, phagemid, oligo-dT primed, C57BL/6J
RIKEN full-length enriched, visual cortexcerebrumnormalbulkuncharacterized treatmentnormal, bulk, full-length enriched, EST, unknown developmental stage, visual cortex, C57BL/6J
Barstead mouse irradiated colon MPLRB7colonnormalbulkuncharacterized treatmentnormal, colon, bulk, adult, EST, stress, phagemid, oligo-dT primed, irradiation, FVB/N
NCI_CGAP_Co24colonnormalbulknon-normalizednormal, non-normalized, colon, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed, FVB/N
Life Tech mouse embryo 10 5dpc 10665016embryonic tissuenormalbulkuncharacterized treatmentnormal, micro-bulk, EST, embryonic tissue, phagemid, oligo-dT primed, C57BL/6J, organogenesis
Life Tech mouse embryo 13 5dpc 10666014embryonic tissuenormalbulkuncharacterized treatmentfetus, normal, micro-bulk, EST, embryonic tissue, directionally cloned, phagemid, oligo-dT primed, C57BL/6J
Mouse eight-cell stage embryo cDNAembryonic tissuenormalbulkuncharacterized treatmentnormal, micro-bulk, EST, embryonic tissue, morula, C57BL/6J
Mouse four-cell-embryo cDNAembryonic tissuenormaluncharacterized preparationuncharacterized treatmentnormal, EST, embryonic tissue, early cleavage, C57BL/6J
Mus musculus head C57BL/6J 12-day embryoembryonic tissuenormalbulkuncharacterized treatmentfetus, normal, micro-bulk, EST, mixed pool by gender, C57BL/6J, embryonic head
NIA Mouse 7.5-dpc Whole Embryo cDNA Library (Long)embryonic tissuenormalbulknon-normalizednormal, non-normalized, bulk, long-transcript enriched, EST, gastrula, mixed tissue, MGC, embryonic tissue, mixed developmental stages, extraembryonic tissue, plasmid vector, oligo-dT primed, C57BL/6J
NIA Mouse E10.5 whole embryo cDNA library (Long)embryonic tissuenormalbulkuncharacterized treatmentnormal, bulk, adult, long-transcript enriched, EST, mixed tissue, MGC, embryonic tissue, PCR directed strategy, cDNA template, mixed developmental stages, extraembryonic tissue, plasmid vector, oligo-dT primed, C57BL/6J, organogenesis
NIA Mouse ES Cell (LIF-) cDNA Library (Long)embryonic tissuenormalcell linenon-normalizednormal, non-normalized, cell line, long-transcript enriched, blastocyst, EST, embryonic stem cell, MGC, PCR directed strategy, cDNA template, inner cell mass, plasmid vector, oligo-dT primed
NIH_BMAP_HJ0embryonic tissuenormalbulknon-normalizednormal, non-normalized, BMAP, bulk, EST, MGC, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6, organogenesis, embryonic head
NIH_MGC_134embryonic tissuenormalbulknon-normalizednormal, non-normalized, bulk, EST, LTI non-normalized, MGC, directionally cloned, phagemid, oligo-dT primed, organogenesis, embryonic limb
NIH_MGC_136embryonic tissuenormalbulknormalizedfetus, normal, bulk, normalized, neonate, EST, LTI normalized, MGC, embryonic tissue, size fractionated, directionally cloned, oligo-dT primed
RIKEN full-length enriched mouse cDNA library, Rathke's pouches 14.5 days embryoembryonic tissueuncharacterized histologyuncharacterized preparationuncharacterized treatmentfetus, uncharacterized histology, full-length enriched, EST, Rathke's pouch
RIKEN full-length enriched, 12 days embryo headembryonic tissuenormalbulkmultiple treatmentfetus, normal, micro-bulk, normalized, subtracted, full-length enriched, EST, mixed pool by gender, C57BL/6J, embryonic head
RIKEN full-length enriched, 14.5 days embryo RP+/+ Rathke's pouchesembryonic tissueuncharacterized histologybulkuncharacterized treatmentfetus, uncharacterized histology, bulk, full-length enriched, EST, Rathke's pouch
RIKEN full-length enriched, 17 days embryo whole bodyembryonic tissuenormalbulkuncharacterized treatmentfetus, normal, bulk, full-length enriched, EST, embryonic tissue, C57BL/6J
RIKEN full-length enriched, 17.5 days embryo whole bodyembryonic tissuenormalbulkuncharacterized treatmentfetus, normal, bulk, full-length enriched, EST, embryonic tissue, C57BL/6J
RIKEN full-length enriched, ES cellsembryonic tissuenormalcell linemultiple treatmentnormal, cell line, normalized, subtracted, full-length enriched, EST, embryonic stem cell, embryonic tissue, unknown embryonic stage, C57BL/6J
RIKEN full-length enriched, Nullipotent stem cell CRL-2070 NE cDNAembryonic tissuecancercell lineuncharacterized treatmentcell line, full-length enriched, teratocarcinoma, EST, gastrula, embryonic tissue, nullipotent stem cell, C3H/J
RIKEN full-length enriched, blastocystembryonic tissuenormalbulkuncharacterized treatmentnormal, bulk, full-length enriched, blastocyst, EST, embryonic tissue, C57BL/6J
Soares mouse embryo NbME13.5 14.5embryonic tissuenormalbulknormalizedfetus, normal, micro-bulk, normalized, EST, Soares normalized, embryonic tissue, size fractionated, oligo-dT primed, C57BL/6J
Soares mouse p3NMF19.5embryonic tissuenormalbulknormalizedfetus, normal, micro-bulk, normalized, EST, Soares normalized, embryonic tissue, size fractionated, oligo-dT primed
Soares mouse urogenital ridge NMURembryonic tissuenormalbulknormalizedfetus, normal, micro-bulk, normalized, EST, Soares normalized, mixed pool by gender, phagemid, oligo-dT primed, gonadal ridge
Sugano mouse embryo mewaembryonic tissuenormalbulkuncharacterized treatmentfetus, normal, micro-bulk, EST, embryonic tissue, size fractionated, phagemid, C57/BL
NIH_BMAP_HD0eyenormalbulknon-normalizedfetus, eye, normal, non-normalized, BMAP, bulk, EST, MGC, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6
NIH_BMAP_HU0eyenormalbulkuncharacterized treatmenteye, normal, BMAP, bulk, juvenile, neonate, EST, MGC, mixed developmental stages, size fractionated, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6
mouse eyeball cDNA Libraryeyenormaluncharacterized preparationuncharacterized treatmenteye, normal, adult, EST, plasmid vector
RIKEN full-length enriched, adult male small intestinegastrointestinal tractnormalbulkmultiple treatmentsmall intestine, normal, bulk, adult, normalized, subtracted, full-length enriched, EST, male
RIKEN full-length enriched, 16 days neonate heartheartnormalbulkuncharacterized treatmentheart, normal, bulk, juvenile, full-length enriched, EST
NCI_CGAP_Kid14kidneynormalbulknon-normalizedkidney, normal, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed, FVB/N
NIH_MGC_176kidneynormalbulknon-normalizedkidney, normal, non-normalized, bulk, full-length enriched, EST, unknown developmental stage, MGC, Clontech non-normalized, size fractionated, plasmid vector, oligo-dT primed
Stratagene mouse kidney (#937315)kidneynormalbulkuncharacterized treatmentkidney, normal, bulk, juvenile, EST, female, size fractionated, directionally cloned, phagemid, oligo-dT primed
Sugano mouse kidney mkiakidneynormalbulkuncharacterized treatmentkidney, normal, bulk, adult, EST, female, size fractionated, phagemid, oligo-dT primed, C57/BL
RIKEN full-length enriched, whole jointslimbnormalbulkuncharacterized treatmentnormal, bulk, full-length enriched, EST, unknown developmental stage, joint
NCI_CGAP_Li10livernormalbulknon-normalizedliver, normal, non-normalized, bulk, adult, CGAP, EST, LTI non-normalized, female, directionally cloned, phagemid, oligo-dT primed
NCI_CGAP_Li9livernormalbulknon-normalizedliver, normal, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed, FVB/N
Soares mouse NMLlivernormalbulknormalizedliver, normal, bulk, normalized, EST, Soares normalized, unknown developmental stage, phagemid, oligo-dT primed
Sugano mouse liver mlialivernormalbulkuncharacterized treatmentliver, normal, bulk, adult, EST, female, size fractionated, phagemid, oligo-dT primed, C57/BL
NCI_CGAP_Lu30lungcancerbulknon-normalizedmetastasis, lung, non-normalized, bulk, transgene, CGAP, EST, LTI non-normalized, unknown developmental stage, MGC, directionally cloned, phagemid, oligo-dT primed, lung tumor, CZECH II
NCI_CGAP_Lu33lungcancerbulknormalizedmetastasis, lung, bulk, transgene, normalized, CGAP, EST, Soares normalized, unknown developmental stage, MGC, phagemid, lung tumor, CZECH II
RIKEN full-length enriched, adult male lunglungnormalbulkuncharacterized treatmentlung, normal, bulk, adult, full-length enriched, EST, male
RIKEN full-length enriched, lung RCB-0558 LLC cDNAlungcancercell lineuncharacterized treatmentlung, invasive, cell line, full-length enriched, EST, unknown developmental stage, lung tumor
NIA Mouse Germinal Center B Cell cDNA Librarylymph nodenormalflow-sorteduncharacterized treatmentlymph node, B-cell, normal, flow-sorted, EST, unknown developmental stage, plasmid vector, oligo-dT primed
Soares mouse lymph node NbMLNlymph nodenormalbulknormalizedlymph node, normal, bulk, normalized, juvenile, EST, Soares normalized, male, phagemid, oligo-dT primed, C57BL/6J
NCI_CGAP_Mam1mammary glandcancerbulknon-normalizedmammary gland, non-normalized, bulk, virgin, TGFalpha, adult, CGAP, EST, LTI non-normalized, MGC, directionally cloned, phagemid, oligo-dT primed, breast (mammary gland) cancer, FVB/N
NCI_CGAP_Mam2mammary glandcancerbulknon-normalizedmammary gland, non-normalized, bulk, adult, CGAP, EST, LTI non-normalized, MGC, directionally cloned, phagemid, oligo-dT primed, breast (mammary gland) cancer, FVB/N-3
NCI_CGAP_Mam3mammary glandcancerbulknon-normalizedmammary gland, non-normalized, bulk, transgene, adult, CGAP, EST, LTI non-normalized, MGC, directionally cloned, phagemid, oligo-dT primed, mixed breed, breast (mammary gland) cancer
NCI_CGAP_Mam4mammary glandcancerbulknon-normalizedmammary gland, non-normalized, bulk, transgene, adult, CGAP, EST, LTI non-normalized, MGC, directionally cloned, phagemid, oligo-dT primed, breast (mammary gland) cancer, NMRI
Soares_mammary_gland_NMLMGmammary glandnormalbulknormalizedmammary gland, normal, bulk, lactating, adult, normalized, CGAP, EST, Soares normalized, MGC, female, phagemid
Soares_mammary_gland_NbMMGmammary glandnormalbulknormalizedmammary gland, normal, bulk, normalized, juvenile, CGAP, EST, Soares normalized, MGC, male, phagemid, oligo-dT primed, C57BL/6J
Eppig Hampl Solter fully-grown mouse oocyteovaryuncharacterized histologyuncharacterized preparationuncharacterized treatmentEST, oocyte, female, size fractionated, C57BL/6J, primary oocyte
NIA Mouse Newborn Ovary cDNA Libraryovarynormalbulkuncharacterized treatmentovary, normal, bulk, neonate, EST, female, size fractionated, plasmid vector, oligo-dT primed, C57BL/6J
Melton Normalized Mixed Mouse Pancreas 1 N1-MMS1pancreasnormalbulknormalizedpancreas, normal, bulk, normalized, EST, Soares normalized, mixed developmental stages, mixed pool by gender, size fractionated, plasmid vector, oligo-dT primed, ICR
NIH_MGC_137pancreasnormalbulknon-normalizedpancreas, normal, non-normalized, bulk, EST, unknown developmental stage, MGC, clone collection, phagemid
RIKEN full-length enriched, 2 days neonate sympathetic ganglionperipheral nervous systemnormalbulkuncharacterized treatmentnormal, bulk, sympathetic ganglion, full-length enriched, neonate, EST, mixed pool by gender, C57BL/6J
NIA Mouse 15K cDNA Clone Setpooled tissuenormalbulkuncharacterized treatmentovary, normal, bulk, unfertilized ovum, mesonephros, neonate, blastocyst, EST, mixed tissue, embryonic tissue, mixed developmental stages, extraembryonic tissue, plasmid vector, oligo-dT primed, C57BL/6J
NIH_BMAP_M_S2pooled tissuenormalbulksubtractednormal, brain stem, cerebellum, cerebral cortex, BMAP, amygdala, bulk, basal ganglia, olfactory bulb, hypothalamus, pineal gland, subtracted, corpus striatum, juvenile, EST, Soares subtracted, mixed tissue, phagemid, C57BL/6J
NIH_BMAP_M_S4pooled tissuenormalbulksubtractednormal, brain stem, cerebellum, cerebral cortex, BMAP, amygdala, bulk, basal ganglia, olfactory bulb, hypothalamus, pineal gland, subtracted, corpus striatum, juvenile, EST, Soares subtracted, phagemid, C57BL/6J
NIH_MGC_178pooled tissuenormalbulknon-normalizedlung, heart, normal, non-normalized, bulk, EST, unknown developmental stage, mixed tissue, MGC, Clontech non-normalized, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
Mouse E14.5 retina lambda ZAP II Libraryretinanormalbulkuncharacterized treatmentfetus, retina, normal, uncharacterized preparation, micro-bulk, EST
NIH_MGC_94retinanormalbulknon-normalizedretina, normal, non-normalized, bulk, full-length enriched, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed
RIKEN full-length enriched mouse cDNA library, C57BL/6J retina adultretinanormaluncharacterized preparationuncharacterized treatmentretina, normal, adult, full-length enriched, EST, C57BL/6J
NCI_CGAP_SG2salivary glandnormalbulknon-normalizednormal, non-normalized, salivary gland, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed, FVB/N
RIKEN full-length enriched, RCB-1283 B16 melanoma cDNAskincancercell lineuncharacterized treatmentskin, melanoma, cell line, full-length enriched, EST, unknown developmental stage, C57BL/6
RIKEN full-length enriched, melanocyteskinnormalbulkuncharacterized treatmentskin, normal, melanocyte, bulk, full-length enriched, EST, unknown developmental stage, C57BL/6J
Stratagene mouse skin (#937313)skinnormalbulkuncharacterized treatmentskin, normal, bulk, adult, EST, female, size fractionated, directionally cloned, phagemid, oligo-dT primed, C57BL/6
Soares mouse 3NbMSspleennormalbulknormalizedspleen, normal, bulk, normalized, juvenile, EST, Soares normalized, male, phagemid, oligo-dT primed, C57BL/6J
McCarrey Eddy round spermatidtestisnormalbulkuncharacterized treatmenttestis, normal, bulk, adult, spermatid, EST, male, size fractionated, directionally cloned, phagemid, oligo-dT primed, CD-1
NCI_CGAP_Te1testisnormalbulknon-normalizedtestis, normal, non-normalized, bulk, adult, CGAP, EST, LTI non-normalized, male, directionally cloned, phagemid, oligo-dT primed
RIKEN full-length enriched, 16 days neonate thymusthymusnormalbulkmultiple treatmentthymus, normal, bulk, normalized, subtracted, juvenile, full-length enriched, EST
RIKEN full-length enriched, 3 days neonate thymusthymusnormalbulkmultiple treatmentthymus, normal, bulk, normalized, subtracted, full-length enriched, neonate, EST
RIKEN full-length enriched, thymus lymphocytethymusnormalflow-sorteduncharacterized treatmentthymus, normal, flow-sorted, full-length enriched, lymphocyte, EST, unknown developmental stage, C57BL/6J
Mouse pBluescript Lionuncharacterized tissueuncharacterized histologyuncharacterized preparationuncharacterized treatmentuncharacterized tissue, uncharacterized preparation, EST, unknown developmental stage
NCI_CGAP_PlTr1uncharacterized tissuenormalbulksubtractednormal, bulk, pregnant, adult, subtracted, CGAP, EST, Soares subtracted, female, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6J, trophoblast
NIA Mouse Trophoblast Stem Cell cDNA Library (Short)uncharacterized tissuenormalcell lineuncharacterized treatmentnormal, cell line, pregnant, adult, short-transcript enriched, EST, female, PCR directed strategy, cDNA template, trophoblast stem cell, plasmid vector, oligo-dT primed, trophoblast
RIKEN full-length enriched, adult male urinary bladderuncharacterized tissuenormalbulkmultiple treatmentbladder, normal, bulk, adult, normalized, subtracted, full-length enriched, EST, male
RIKEN full-length enriched, stroma celluncharacterized tissuenormalbulkuncharacterized treatmentnormal, uncharacterized tissue, bulk, full-length enriched, EST, unknown developmental stage, C57BL/6J, stromal cell