Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Library List

Libraries for cluster Mm.254629

[Full Text]
Displaying 1 thru 68 of 68 items
TitleTissueHistologyTypeProtocolKeywords
Soares_mouse_NMBPbonenormalbulknormalizedbone, normal, bulk, normalized, EST, Soares normalized, unknown developmental stage, phagemid, oligo-dT primed
Hematopoietic stem cellsbone marrowuncharacterized histologyflow-sorteduncharacterized treatmentbone marrow, flow-sorted, hematopoietic cell, EST, unknown developmental stage
Mouse brain, Stratagenebrainnormalbulkuncharacterized treatmentnormal, bulk, juvenile, EST, phage vector, directionally cloned, oligo-dT primed, whole brain
NIA Mouse Newborn Brain cDNA Librarybrainnormalbulkuncharacterized treatmentnormal, bulk, neonate, EST, plasmid vector, oligo-dT primed, C57BL/6J, whole brain
NIH_BMAP_DJ2brainnormalbulksubtractednormal, BMAP, bulk, adult, subtracted, EST, Soares subtracted, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6, subfornical organ, area postrema (AP)
NIH_BMAP_EW0brainnormalbulknon-normalizedfetus, normal, non-normalized, BMAP, bulk, EST, Soares non-normalized, MGC, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6, whole brain
NIH_BMAP_GM0brainnormalbulknon-normalizednormal, non-normalized, BMAP, bulk, juvenile, neonate, EST, Soares non-normalized, MGC, size fractionated, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6, whole brain
NIH_MGC_144brainnormalbulknon-normalizednormal, non-normalized, bulk, full-length enriched, EST, unknown developmental stage, MGC, size fractionated, plasmid vector, directionally cloned, oligo-dT primed, whole brain
RIKEN full-length enriched mouse cDNA library, C57BL/6J medulla oblongata male adultbrainnormaluncharacterized preparationuncharacterized treatmentnormal, adult, medulla oblongata, full-length enriched, EST, male, C57BL/6J
RIKEN full-length enriched, adult male corpora quadrigeminabrainnormalbulkmultiple treatmentnormal, bulk, adult, normalized, subtracted, full-length enriched, corpora quadrigemina, EST, male
RIKEN full-length enriched, adult male corpus striatumbrainnormalbulkmultiple treatmentnormal, bulk, adult, normalized, subtracted, corpus striatum, full-length enriched, EST, male, C57BL/6J
RIKEN full-length enriched, adult male medulla oblongatabrainnormalbulkmultiple treatmentnormal, bulk, adult, normalized, subtracted, medulla oblongata, full-length enriched, EST, male, C57BL/6J
Mus musculus cerebellum E18-P56cerebellumnormaluncharacterized preparationuncharacterized treatmentnormal, cerebellum, EST, mixed developmental stages, mixed pool by gender
RIKEN full-length enriched, 10 days neonate cerebellumcerebellumnormalbulkmultiple treatmentnormal, cerebellum, bulk, normalized, subtracted, juvenile, full-length enriched, EST, mixed pool by gender, C57BL/6J
Mouse Neurosphere Normalized cDNA librarycerebrumnormalcell linenormalizednormal, cell line, adult, normalized, EST, neurosphere, mixed pool by gender, plasmid vector, lateral ventricle wall, C57BL/6
NIH_BMAP_MCO_Ncerebrumnormalbulknormalizednormal, frontal cortex, BMAP, bulk, normalized, juvenile, EST, Soares normalized, phagemid, oligo-dT primed, C57BL/6J
NIH_BMAP_MHI2_S1cerebrumnormalbulksubtractednormal, hippocampus, BMAP, bulk, subtracted, juvenile, EST, Soares subtracted, phagemid, C57BL/6J
RIKEN full-length enriched mouse cDNA library, C57BL/6J visual cortexcerebrumnormaluncharacterized preparationuncharacterized treatmentnormal, full-length enriched, EST, unknown developmental stage, visual cortex, C57BL/6J
RIKEN full-length enriched, 10 days neonate cortexcerebrumnormalbulkmultiple treatmentnormal, cerebral cortex, bulk, normalized, subtracted, juvenile, full-length enriched, EST
NCI_CGAP_Co24colonnormalbulknon-normalizednormal, non-normalized, colon, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed, FVB/N
RIKEN full-length enriched, adult inner earearnormalbulkuncharacterized treatmentnormal, bulk, adult, full-length enriched, EST, inner ear, C57BL/6J
Abe mouse ES cellembryonic tissueuncharacterized histologycell lineuncharacterized treatmentcell line, embryonic stem cell, embryonic tissue, unknown embryonic stage, oligo-dT primed, EST
Knowles Solter mouse 2 cellembryonic tissuenormalbulkuncharacterized treatmentnormal, micro-bulk, EST, embryonic tissue, early cleavage, size fractionated, directionally cloned, oligo-dT primed, crossbred
Mouse sixteen-cell-embryo cDNAembryonic tissuenormaluncharacterized preparationuncharacterized treatmentnormal, EST, embryonic tissue, morula, C57BL/6J
RIKEN full-length enriched, 12 days embryo male wolffian ductembryonic tissuenormalbulkuncharacterized treatmentfetus, normal, micro-bulk, wolffian duct, full-length enriched, EST, male, C57BL/6J
RIKEN full-length enriched, 16 days embryo headembryonic tissuenormalbulkuncharacterized treatmentfetus, normal, micro-bulk, full-length enriched, EST, mixed pool by gender, C57BL/6J, embryonic head
Mouse Whole eye, equalized: ja/jb/jceyenormaluncharacterized preparationnormalizedeye, normal, adult, normalized, EST, plasmid vector, directionally cloned, C57BL/6J
Mouse lacrimal gland, unamplified: oueyenormalbulkuncharacterized treatmentnormal, bulk, adult, EST, male, lacrimal gland, plasmid vector, C57BL/6
Barstead bowel MPLRB9gastrointestinal tractnormalbulkuncharacterized treatmentnormal, bulk, adult, intestine, EST, stress, phagemid, oligo-dT primed, irradiation, FVB/N
RIKEN full-length enriched, 17 days embryo heartheartnormalbulkuncharacterized treatmentfetus, heart, normal, bulk, full-length enriched, EST, C57BL/6J
GuayWoodford Beier mouse kidney day 0kidneynormalbulkuncharacterized treatmentkidney, normal, bulk, neonate, EST, size fractionated, directionally cloned, phagemid, oligo-dT primed, C57BL/6J
NCI_CGAP_Kid14kidneynormalbulknon-normalizedkidney, normal, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed, FVB/N
RIKEN full-length enriched, 0 day neonate kidneykidneynormalbulkuncharacterized treatmentkidney, normal, bulk, full-length enriched, neonate, EST
Sugano mouse kidney mkiakidneynormalbulkuncharacterized treatmentkidney, normal, bulk, adult, EST, female, size fractionated, phagemid, oligo-dT primed, C57/BL
RIKEN full-length enriched, 13 days embryo liverlivernormalbulkuncharacterized treatmentfetus, liver, normal, micro-bulk, full-length enriched, EST
Soares mouse NMLlivernormalbulknormalizedliver, normal, bulk, normalized, EST, Soares normalized, unknown developmental stage, phagemid, oligo-dT primed
NCI_CGAP_Lu29lungcancerbulknon-normalizedmetastasis, lung, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, MGC, directionally cloned, phagemid, oligo-dT primed, lung tumor, CZECH II
NCI_CGAP_Mam5mammary glandcancerbulknon-normalizedmammary gland, non-normalized, bulk, TGFalpha, adult, CGAP, EST, LTI non-normalized, MGC, directionally cloned, phagemid, oligo-dT primed, mixed breed, breast (mammary gland) cancer
RIKEN full-length enriched mouse cDNA library, mammary gland RCB-0526 Jyg-MC(A)mammary glanduncharacterized histologycell lineuncharacterized treatmentmammary gland, uncharacterized histology, cell line, full-length enriched, EST, unknown developmental stage, female
RIKEN full-length enriched, mammary gland RCB-0526 Jyg-MC(A) cDNAmammary glandcancercell lineuncharacterized treatmentmammary gland, cell line, full-length enriched, EST, unknown developmental stage, breast (mammary gland) cancer
Soares_mammary_gland_NMLMGmammary glandnormalbulknormalizedmammary gland, normal, bulk, lactating, adult, normalized, CGAP, EST, Soares normalized, MGC, female, phagemid
Soares_mammary_gland_NbMMGmammary glandnormalbulknormalizedmammary gland, normal, bulk, normalized, juvenile, CGAP, EST, Soares normalized, MGC, male, phagemid, oligo-dT primed, C57BL/6J
RIKEN full-length enriched, adult male spinal cordnervousnormalbulkmultiple treatmentspinal cord, normal, bulk, adult, normalized, subtracted, full-length enriched, EST, male
NIH_MGC_257ovarynormalbulknormalizednormal, bulk, normalized, EST, MGC, oocyte, size fractionated, plasmid vector, directionally cloned, oligo-dT primed, primary oocyte
RIKEN full-length enriched mouse cDNA library, C57BL/6J pancreas male 10 day oldpancreasnormaluncharacterized preparationuncharacterized treatmentpancreas, normal, full-length enriched, neonate, EST, male, C57BL/6J
NIH_MGC_166pituitary glandnormalbulknon-normalizednormal, non-normalized, pituitary gland, bulk, full-length enriched, EST, unknown developmental stage, MGC, Clontech non-normalized, plasmid vector
RIKEN full-length enriched, 18 days pregnant, placenta and extra embryonic tissueplacentanormalbulkmultiple treatmentnormal, placenta, bulk, pregnant, adult, normalized, subtracted, full-length enriched, EST, C57BL/6J
NIA Mouse 15K cDNA Clone Setpooled tissuenormalbulkuncharacterized treatmentovary, normal, bulk, unfertilized ovum, mesonephros, neonate, blastocyst, EST, mixed tissue, embryonic tissue, mixed developmental stages, extraembryonic tissue, plasmid vector, oligo-dT primed, C57BL/6J
NIH_BMAP_M_S1pooled tissuenormalbulksubtractednormal, hippocampus, brain stem, cerebellum, cerebral cortex, BMAP, amygdala, bulk, basal ganglia, olfactory bulb, hypothalamus, pineal gland, subtracted, corpus striatum, juvenile, EST, Soares subtracted, phagemid, C57BL/6J
NIH_BMAP_M_S2pooled tissuenormalbulksubtractednormal, brain stem, cerebellum, cerebral cortex, BMAP, amygdala, bulk, basal ganglia, olfactory bulb, hypothalamus, pineal gland, subtracted, corpus striatum, juvenile, EST, Soares subtracted, mixed tissue, phagemid, C57BL/6J
RIKEN full-length enriched, pooled tissues, 16 days embryo, etc.pooled tissuenormalbulkuncharacterized treatmentkidney, stomach, liver, heart, normal, bulk, full-length enriched, amnion, EST, mixed tissue, mixed developmental stages
RIKEN full-length enriched, pooled tissues, adult intestinal mucosa, etc.pooled tissuenormalbulkuncharacterized treatmentlymph node, spinal cord, ovary, uterus, testis, lung, gallbladder, normal, cerebellum, cerebral cortex, bulk, pregnant, adult, diencephalon, intestine, medulla oblongata, full-length enriched, neonate, mucosa, EST, vesicular gland, mixed tissue, mixed developmental stages, C57BL/6J
RIKEN full-length enriched, pooled tissues, bladder, etc.pooled tissueuncharacterized histologycell lineuncharacterized treatmentbone marrow, skin, kidney, bladder, B-cell, stem cell, colon, cell line, full-length enriched, mixed (normal and tumor), EST, mixed tissue, mixed developmental stages, mixed pool by gender
Mouse retina, unamplified: mk/mlretinanormalbulkuncharacterized treatmentretina, normal, bulk, adult, EST, male, plasmid vector, C57BL/6J
NIH_BMAP_Ret4_S2retinanormalbulksubtractedretina, normal, BMAP, bulk, subtracted, EST, Soares subtracted, mixed developmental stages, phagemid, C57BL/6J
NIH_MGC_94retinanormalbulknon-normalizedretina, normal, non-normalized, bulk, full-length enriched, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed
Stratagene mouse skin (#937313)skinnormalbulkuncharacterized treatmentskin, normal, bulk, adult, EST, female, size fractionated, directionally cloned, phagemid, oligo-dT primed, C57BL/6
Gastric Epithelial Progenitorstomachuncharacterized histologymicrodissecteduncharacterized treatmentstomach, uncharacterized histology, microdissected, adult, EST, plasmid vector, epithelial progenitor
Soares_thymus_2NbMTthymusnormalbulknormalizedthymus, normal, bulk, normalized, juvenile, CGAP, EST, Soares normalized, MGC, male, phagemid, oligo-dT primed, C57BL/6J
Mouse pBluescript Lionuncharacterized tissueuncharacterized histologyuncharacterized preparationuncharacterized treatmentuncharacterized tissue, uncharacterized preparation, EST, unknown developmental stage
NCI_CGAP_PlTr1uncharacterized tissuenormalbulksubtractednormal, bulk, pregnant, adult, subtracted, CGAP, EST, Soares subtracted, female, plasmid vector, directionally cloned, oligo-dT primed, C57BL/6J, trophoblast
NIH_MGC_190uncharacterized tissuenormalbulknon-normalizednormal, non-normalized, bulk, full-length enriched, EST, unknown developmental stage, MGC, molar, plasmid vector
RIKEN full-length enriched mouse cDNA library, C57BL/6 pooled tissue 1uncharacterized tissueuncharacterized histologyuncharacterized preparationuncharacterized treatmentfull-length enriched, EST, mixed tissue, mixed developmental stages, mixed pool by gender, C57BL/6J
RIKEN full-length enriched mouse cDNA library, pooled tissue 5uncharacterized tissuenormaluncharacterized preparationuncharacterized treatmentnormal, full-length enriched, EST, mixed tissue, mixed developmental stages, mixed pool by gender
RIKEN full-length enriched, 2 days pregnant adult female oviductuncharacterized tissuenormalbulkuncharacterized treatmentnormal, bulk, pregnant, adult, oviduct, full-length enriched, EST, female
Mouse 3'-directeduterusnormalbulkuncharacterized treatmentnormal, bulk, pregnant, adult, EST, female, decidua, C57BL/6J
Soares_NMPuuterusnormalbulknormalizeduterus, normal, bulk, pregnant, adult, normalized, CGAP, EST, Soares normalized, MGC, female, phagemid, oligo-dT primed
RIKEN full-length enriched, adult male aorta and veinvascularnormalbulkmultiple treatmentartery, vein, normal, bulk, adult, normalized, subtracted, full-length enriched, EST, male