Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Library List

Libraries for cluster Hs.343627

[Full Text]
Displaying 1 thru 104 of 104 items
TitleTissueHistologyTypeProtocolKeywords
NIH_MGC_54bone marrowcancercell linenon-normalizedbone marrow, non-normalized, chronic myelogenous leukemia, cell line, full-length enriched, EST, unknown developmental stage, MGC, Clontech non-normalized, size fractionated, plasmid vector
Pediatric acute myelogenous leukemia cell (FAB M1) Baylor-HGSC project=TCAAbone marrowcancerflow-sortednormalizedbone marrow, white blood cell, flow-sorted, normalized, juvenile, full-length enriched, acute myelogenous leukemia, EST, male, directionally cloned
Sugano cDNA library, bone marrow K562bone marrowcancercell lineuncharacterized treatmentbone marrow, uncharacterized preparation, chronic myelogenous leukemia, cell line, adult, EST, female
BNGH42braincancercell lineuncharacterized treatmentbrain, uncharacterized preparation, cell line, adult, glioma, EST, male
BRCAN2brainnormaluncharacterized preparationuncharacterized treatmentnormal, uncharacterized preparation, EST, caudate nucleus, unknown developmental stage
BRTHA2brainnormaluncharacterized preparationuncharacterized treatmentnormal, uncharacterized preparation, thalamus, EST, unknown developmental stage
BRTHA3brainnormaluncharacterized preparationuncharacterized treatmentnormal, uncharacterized preparation, thalamus, EST, unknown developmental stage
Infant Brain, Bento Soaresbrainnormalbulknon-normalizednormal, non-normalized, bulk, EST, infant, whole brain
NIH_MGC_121brainnormalbulknormalizedfetus, brain, normal, bulk, normalized, full-length enriched, EST, LTI normalized, MGC, mixed pool by gender, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
NIH_MGC_96brainnormalbulknormalizednormal, bulk, hypothalamus, normalized, full-length enriched, EST, unknown developmental stage, MGC, size fractionated, phagemid, oligo-dT primed
OCBBF2brainnormaluncharacterized preparationuncharacterized treatmentfetus, normal, uncharacterized preparation, EST, whole brain
OCBBF3brainnormaluncharacterized preparationuncharacterized treatmentfetus, normal, uncharacterized preparation, EST, whole brain
Soares infant brain 1NIBbrainnormalbulknormalizednormal, bulk, normalized, EST, Soares normalized, female, infant, directionally cloned, oligo-dT primed, whole brain
NCI_CGAP_EI1cartilagecancerbulknormalizedmetastasis, cartilage, chondrosarcoma, bulk, adult, normalized, CGAP, EST, Soares normalized, MGC, plasmid vector, directionally cloned, oligo-dT primed
BRACE2cerebellumnormaluncharacterized preparationuncharacterized treatmentnormal, cerebellum, uncharacterized preparation, EST, unknown developmental stage
BRAMY2cerebrumnormaluncharacterized preparationuncharacterized treatmentnormal, amygdala, uncharacterized preparation, EST, unknown developmental stage
BRHIP2cerebrumnormaluncharacterized preparationuncharacterized treatmentnormal, hippocampus, uncharacterized preparation, EST, unknown developmental stage
NN1207cerebrumnormalbulkuncharacterized treatmentnormal, cerebral cortex, bulk, adult, ORESTES, EST, plasmid vector
NIH_MGC_12cervixcancercell linenon-normalizedcervix, non-normalized, cell line, EST, LTI non-normalized, unknown developmental stage, MGC, female, size fractionated, directionally cloned, phagemid, oligo-dT primed, cervical carcinoma
CT0204coloncancerbulkuncharacterized treatmentcolon, bulk, adult, ORESTES, EST, plasmid vector, colorectal cancer
CT0380coloncancerbulkuncharacterized treatmentcolon, bulk, adult, ORESTES, EST, plasmid vector, colorectal cancer
Human colorectal cancercoloncancerbulknon-normalizednon-normalized, colon, bulk, adult, EST, male, colorectal cancer
NCI_CGAP_Co3coloncancerbulknormalizedcolon, bulk, normalized, CGAP, EST, Soares normalized, unknown developmental stage, phagemid, colorectal cancer
Soares_Dieckgraefe_colon_NHCDcolonuncharacterized histologybulknormalizedepithelium, Crohn's disease, colon, bulk, normalized, CGAP, EST, Soares normalized, unknown developmental stage, phagemid, oligo-dT primed
GRN_ESembryonic tissuenormalcell lineuncharacterized treatmentnormal, cell line, full-length enriched, blastocyst, EST, embryonic stem cell, embryonic tissue, H9, H1, H7, oligo-dT primed
GRN_PREHEPembryonic tissuenormalcell lineuncharacterized treatmentnormal, cell line, EST, embryonic stem cell, DMSO, embryonic tissue, unknown embryonic stage, H9
Soares_total_fetus_Nb2HF8_9wembryonic tissuenormalbulknormalizednormal, bulk, normalized, CGAP, EST, Soares normalized, embryonic tissue, first trimester, phagemid, oligo-dT primed
NCI_CGAP_Eso2esophaguscancerbulknon-normalizedesophagus, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, size fractionated, directionally cloned, phagemid, oligo-dT primed, squamous cell carcinoma of the esophagus
TESOP2esophaguscanceruncharacterized preparationuncharacterized treatmentesophagus, uncharacterized preparation, EST, unknown developmental stage, esophageal tumor
FEHRT2heartnormaluncharacterized preparationuncharacterized treatmentfetus, heart, normal, uncharacterized preparation, EST
Soares_fetal_heart_NbHH19Wheartnormalbulknormalizedfetus, heart, normal, bulk, normalized, CGAP, EST, Soares normalized, phagemid, oligo-dT primed
KIDNE2kidneynormaluncharacterized preparationuncharacterized treatmentkidney, normal, uncharacterized preparation, EST, unknown developmental stage
MESAN2kidneynormalcell lineuncharacterized treatmentkidney, normal, uncharacterized preparation, cell line, EST, unknown developmental stage, mesangial cell
NCI_CGAP_Kid11kidneynormalbulkmultiple treatmentkidney, normal, bulk, normalized, subtracted, CGAP, EST, Soares subtracted, unknown developmental stage, phagemid
NCI_CGAP_Kid13kidneycancerbulknon-normalizedmetastasis, kidney, Wilms' tumor, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, phagemid, oligo-dT primed
TKIDN2kidneycanceruncharacterized preparationuncharacterized treatmentkidney, uncharacterized preparation, EST, unknown developmental stage, kidney tumor
NCI_CGAP_Lu19lungcancerbulknormalizedlung, poorly differentiated, bulk, adult, normalized, CGAP, EST, Soares normalized, phagemid, oligo-dT primed, lung squamous cell carcinoma
NIH_MGC_212lungcancercell lineuncharacterized treatmentmetastasis, lung, chondrosarcoma, cell line, EST, unknown developmental stage, MGC, size fractionated, plasmid vector, oligo-dT primed
NIH_MGC_69lungcancercell linenon-normalizedlung, non-normalized, cell line, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, phagemid, oligo-dT primed, non-small cell lung cancer
NIH_MGC_7lungcancercell linenon-normalizedlung, non-normalized, cell line, EST, unknown developmental stage, MGC, Rubin non-normalized, size fractionated, plasmid vector, directionally cloned, oligo-dT primed, small cell lung cancer
Sugano cDNA library, fetal lung fibroblast TIGlunguncharacterized histologycell lineuncharacterized treatmentfetus, lung, fibroblast, uncharacterized histology, cell line, EST
NCI_CGAP_GCB1lymph nodenormalflow-sortednormalizedlymph node, B-cell, normal, flow-sorted, normalized, CGAP, EST, Soares normalized, unknown developmental stage, MGC
Pediatric pre-B cell acute lymphoblastic leukemia Baylor-HGSC project=TCBAlymph nodecancerflow-sortednormalizedlymph node, acute lymphocytic leukemia, flow-sorted, normalized, juvenile, EST, male, directionally cloned, oligo-dT primed
NIH_MGC_85lymphoreticularcancercell linenon-normalizedlymphoma, non-normalized, cell line, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed, lymph
TBAES2mammary glandcanceruncharacterized preparationuncharacterized treatmentmammary gland, uncharacterized preparation, adult, EST, female, breast (mammary gland) cancer
Sugano cDNA library, fetal musclemusclenormaluncharacterized preparationuncharacterized treatmentfetus, muscle, normal, uncharacterized preparation, EST
Lupski_dorsal_root_ganglionnervousnormalbulknon-normalizednormal, non-normalized, bulk, adult, dorsal root ganglion, CGAP, EST, MGC, male, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
NCI_CGAP_Ov23ovarycancerbulknon-normalizedmetastasis, ovary, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, size fractionated, directionally cloned, phagemid, oligo-dT primed, papillary ovarian carcinoma, serous ovarian tumor, clear cell ovarian tumor, spindle cell ovarian tumor, mixed tumors, mixed mullerian tumor of the ovary
NIH_MGC_66ovarycancercell linenon-normalizedovary, non-normalized, cell line, EST, LTI non-normalized, unknown developmental stage, MGC, female, size fractionated, directionally cloned, phagemid, oligo-dT primed, ovarian adenocarcinoma
Homo sapiens pancreatic isletpancreatic isletnormaluncharacterized preparationuncharacterized treatmentpancreatic islet, normal, uncharacterized preparation, EST, unknown developmental stage
GN0323placentanormalbulkuncharacterized treatmentnormal, placenta, bulk, adult, ORESTES, EST
Homo sapiens PLACENTA COT 25-NORMALIZEDplacentanormalbulknormalizednormal, placenta, bulk, pregnant, adult, normalized, EST, female, size fractionated, oligo-dT primed
NCI_CGAP_Pl3placentanormalbulksubtractednormal, placenta, bulk, pregnant, adult, subtracted, CGAP, EST, Soares subtracted, female, plasmid vector, directionally cloned, oligo-dT primed
PLACE6placentanormaluncharacterized preparationuncharacterized treatmentnormal, placenta, pregnant, adult, EST, female
Soares_placenta_8to9weeks_2NbHP8to9Wplacentanormalbulknon-normalizednormal, non-normalized, placenta, bulk, pregnant, adult, CGAP, EST, Soares non-normalized, female, phagemid, oligo-dT primed
NIH_MGC_115pooled tissuenormalbulknormalizedbrain, testis, lung, normal, bulk, adult, normalized, full-length enriched, EST, LTI normalized, mixed tissue, MGC, male, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
Soares_NFL_T_GBC_S1pooled tissuenormalbulksubtractedfetus, testis, lung, B-cell, normal, bulk, subtracted, CGAP, EST, Soares subtracted, mixed tissue, mixed developmental stages
Soares_NSF_F8_9W_OT_PA_P_S1pooled tissueuncharacterized histologybulksubtractedfetus, parathyroid, ovary, placenta, uncharacterized histology, bulk, adult, subtracted, CGAP, EST, Soares subtracted, mixed tissue, mixed developmental stages
Soares_NhHMPu_S1pooled tissuenormalbulksubtractedfetus, skin, uterus, heart, normal, melanocyte, bulk, subtracted, CGAP, EST, Soares subtracted, mixed tissue, mixed developmental stages, phagemid
NCI_CGAP_Pr28prostatenormalbulksubtractedprostate, normal, bulk, adult, subtracted, CGAP, EST, Soares subtracted, male, phagemid
NIH_MGC_40prostatecancercell linenon-normalizedprostate, non-normalized, cell line, EST, unknown developmental stage, MGC, Rubin non-normalized, male, plasmid vector, directionally cloned, oligo-dT primed, prostate cancer
PROST2prostatenormaluncharacterized preparationuncharacterized treatmentprostate, normal, uncharacterized preparation, EST, unknown developmental stage, male
conormprostatenormalbulkuncharacterized treatmentprostate, normal, bulk, EST, unknown developmental stage, male, plasmid vector
DFNES2skinnormalcell lineuncharacterized treatmentskin, fibroblast, normal, uncharacterized preparation, cell line, neonate, EST
NIH_MGC_72skincancercell linenon-normalizedskin, melanoma, non-normalized, cell line, EST, LTI non-normalized, unknown developmental stage, MGC, directionally cloned, phagemid, oligo-dT primed
Soares_senescent_fibroblasts_NbHSFskinnormalbulknormalizedskin, fibroblast, normal, bulk, normalized, CGAP, EST, Soares normalized, unknown developmental stage, phagemid, oligo-dT primed
SPLEN2spleennormaluncharacterized preparationuncharacterized treatmentspleen, normal, uncharacterized preparation, EST, unknown developmental stage
NCI_CGAP_Gas4stomachcancerbulknon-normalizedstomach, poorly differentiated, non-normalized, bulk, adult, CGAP, EST, LTI non-normalized, size fractionated, directionally cloned, phagemid, oligo-dT primed, gastric signet-ring cell adenocarcinoma
STOMA2stomachnormaluncharacterized preparationuncharacterized treatmentstomach, normal, uncharacterized preparation, EST, unknown developmental stage
SYNOV2synoviumuncharacterized histologyuncharacterized preparationuncharacterized treatmentsynovium, uncharacterized preparation, EST, unknown developmental stage, rheumatoid arthritis
SYNOV4synoviumuncharacterized histologyuncharacterized preparationuncharacterized treatmentsynovium, uncharacterized preparation, EST, unknown developmental stage, rheumatoid arthritis
NIH_MGC_82testisnormalbulknon-normalizedtestis, normal, non-normalized, bulk, full-length enriched, EST, unknown developmental stage, MGC, Clontech non-normalized, male, size fractionated, plasmid vector
NIH_MGC_97testisnormalbulknormalizedtestis, normal, bulk, normalized, full-length enriched, EST, unknown developmental stage, MGC, male, size fractionated, phagemid, oligo-dT primed
NT2RP2testiscancercell lineuncharacterized treatmentmetastasis, testis, cell line, adult, retinoic acid, teratocarcinoma, EST, male, neural progenitor cell
NT2RP3testiscancercell lineuncharacterized treatmentmetastasis, testis, cell line, adult, retinoic acid, teratocarcinoma, EST, male, neural progenitor cell
NT2RP7testiscancercell lineuncharacterized treatmentmetastasis, testis, cell line, adult, retinoic acid, teratocarcinoma, EST, male, neural progenitor cell
RIKEN full-length enriched human cDNA library, testistestisuncharacterized histologyuncharacterized preparationuncharacterized treatmenttestis, uncharacterized histology, full-length enriched, EST, unknown developmental stage, male
Soares_testis_NHTtestisnormalbulknormalizedtestis, normal, bulk, normalized, CGAP, EST, Soares normalized, unknown developmental stage, male, oligo-dT primed
Stratagene NT2 neuronal precursor 937230testiscancercell linenon-normalizedmetastasis, testis, non-normalized, cell line, adult, embryonal carcinoma, EST, male, directionally cloned, phagemid, oligo-dT primed, neuroepithelium
TESTI2testisnormaluncharacterized preparationuncharacterized treatmenttestis, normal, uncharacterized preparation, EST, unknown developmental stage, male
TESTI4testisuncharacterized histologyuncharacterized preparationuncharacterized treatmenttestis, uncharacterized preparation, uncharacterized histology, EST, unknown developmental stage, male
THYMU3thymusuncharacterized histologyuncharacterized preparationuncharacterized treatmentthymus, uncharacterized preparation, uncharacterized histology, EST, unknown developmental stage
THYRO1thyroidnormalbulkuncharacterized treatmentthyroid, normal, bulk, EST, unknown developmental stage
781 (synonym: hlcc4)uncharacterized tissueuncharacterized histologyuncharacterized preparationuncharacterized treatmentuncharacterized tissue, uncharacterized preparation, uncharacterized histology, adult, EST
CTONG2uncharacterized tissuecanceruncharacterized preparationuncharacterized treatmenttongue, uncharacterized preparation, EST, unknown developmental stage, oral tumor
Homo sapiens B CELLS (RAMOS CELL LINE) COT 25-NORMALIZEDuncharacterized tissuecancercell linenormalizedB-cell, Burkitt's lymphoma, uncharacterized tissue, cell line, normalized, juvenile, EST, male
Homo sapiens NEUROBLASTOMA COT 10-NORMALIZEDuncharacterized tissuecanceruncharacterized preparationnormalizedneuroblastoma, uncharacterized tissue, uncharacterized preparation, normalized, EST, unknown developmental stage, oligo-dT primed
Homo sapiens NEUROBLASTOMA COT 25-NORMALIZEDuncharacterized tissuecanceruncharacterized preparationnormalizedneuroblastoma, uncharacterized tissue, uncharacterized preparation, normalized, EST, unknown developmental stage, oligo-dT primed
MAGE resequences, MAGFuncharacterized tissueuncharacterized histologyuncharacterized preparationuncharacterized treatmentuncharacterized tissue, uncharacterized preparation, uncharacterized histology, EST, unknown developmental stage
NB9N42uncharacterized tissuecancercell lineuncharacterized treatmentneuroblastoma, uncharacterized tissue, uncharacterized preparation, cell line, EST, unknown developmental stage
NCI_CGAP_CLL1uncharacterized tissuecancerflow-sortednormalizedB-cell, chronic lymphocytic leukemia, uncharacterized tissue, flow-sorted, normalized, CGAP, EST, Soares normalized, unknown developmental stage, phagemid, oligo-dT primed
NCI_CGAP_GC6uncharacterized tissuecancerbulksubtractedgerm cell tumor, uncharacterized tissue, bulk, subtracted, CGAP, EST, Soares subtracted, unknown developmental stage, phagemid
NCI_CGAP_Sub3uncharacterized tissueuncharacterized histologybulksubtracteduncharacterized tissue, uncharacterized histology, bulk, subtracted, CGAP, EST, Soares subtracted, mixed tissue, mixed developmental stages, phagemid
NETRP2uncharacterized tissuenormalcell lineuncharacterized treatmentblood, normal, cell line, EST, unknown developmental stage, neutrophil
NT2RI2uncharacterized tissuecancercell lineuncharacterized treatmentcell line, adult, retinoic acid, teratocarcinoma, EST, male, neuron, mitotic inhibitor, neural progenitor cell, mixed agents
NTONG2uncharacterized tissuenormaluncharacterized preparationuncharacterized treatmentnormal, tongue, uncharacterized preparation, EST, unknown developmental stage
PEBLM2uncharacterized tissuenormalcell lineuncharacterized treatmentblood, normal, uncharacterized preparation, cell line, peripheral blood mononuclear cell, EST, unknown developmental stage
S10SNU1uncharacterized tissuecancercell lineuncharacterized treatmentmetastasis, cell line, adult, full-length enriched, ascites, EST, male, plasmid vector, stomach cancer
S11SNU1uncharacterized tissuecancercell lineuncharacterized treatmentmetastasis, cell line, adult, full-length enriched, ascites, EST, male, plasmid vector, stomach cancer
NCI_CGAP_Ut1uteruscancerbulknon-normalizedwell differentiated, non-normalized, endometrium, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, female, size fractionated, directionally cloned, phagemid, oligo-dT primed, endometrial carcinoma
TitleTissueHistologyTypeProtocolKeywords
UTERU2uterusuncharacterized histologyuncharacterized preparationuncharacterized treatmentuterus, uncharacterized histology, EST, unknown developmental stage, female
Aorta endothelial cellsvascularnormalbulknon-normalizednormal, non-normalized, endothelium, bulk, adult, EST, aorta
HCASM2vascularnormalcell lineuncharacterized treatmentsmooth muscle, normal, uncharacterized preparation, cell line, EST, unknown developmental stage, coronary artery
PUAEN2vascularnormalcell lineuncharacterized treatmentartery, normal, endothelium, uncharacterized preparation, cell line, EST, unknown developmental stage