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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Library List

Libraries for cluster Hs.23388

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Displaying 1 thru 87 of 87 items
TitleTissueHistologyTypeProtocolKeywords
NCI_CGAP_DF1bonenormalbulknormalizedbone, normal, bulk, adult, normalized, CGAP, EST, Soares normalized, MGC, plasmid vector, directionally cloned, oligo-dT primed
BRAWH2brainnormaluncharacterized preparationuncharacterized treatmentbrain, normal, uncharacterized preparation, EST, unknown developmental stage
BRAWH3brainnormaluncharacterized preparationuncharacterized treatmentbrain, normal, uncharacterized preparation, EST, unknown developmental stage
BRTHA2brainnormaluncharacterized preparationuncharacterized treatmentnormal, uncharacterized preparation, thalamus, EST, unknown developmental stage
BRTHA3brainnormaluncharacterized preparationuncharacterized treatmentnormal, uncharacterized preparation, thalamus, EST, unknown developmental stage
Human fetal brain, large insert, pCMV expression librarybrainnormaluncharacterized preparationuncharacterized treatmentfetus, normal, full-length enriched, EST, plasmid vector, oligo-dT primed, whole brain
NCI_CGAP_Brn23braincancerbulknormalizedbrain, glioblastoma multiforme, bulk, normalized, CGAP, EST, Soares normalized, unknown developmental stage, directionally cloned, phagemid, oligo-dT primed
NIH_MGC_56brainmultiple histologycell linenon-normalizedbrain, normal, non-normalized, cell line, full-length enriched, EST, unknown developmental stage, MGC, Clontech non-normalized, primitive neuroectodermal tumor of the CNS
NIH_MGC_96brainnormalbulknormalizednormal, bulk, hypothalamus, normalized, full-length enriched, EST, unknown developmental stage, MGC, size fractionated, phagemid, oligo-dT primed
Soares adult brain N2b5HB55Ybrainnormalbulknormalizedbrain, normal, bulk, adult, normalized, EST, Soares normalized, male, phagemid, oligo-dT primed
Soares infant brain 1NIBbrainnormalbulknormalizednormal, bulk, normalized, EST, Soares normalized, female, infant, directionally cloned, oligo-dT primed, whole brain
Soares_multiple_sclerosis_2NbHMSPbrainuncharacterized histologybulknormalizedbrain, multiple sclerosis, bulk, adult, normalized, CGAP, EST, Soares normalized, male, size fractionated
NCI_CGAP_DT1cartilagecancerbulknormalizedmetastasis, cartilage, chondrosarcoma, bulk, adult, normalized, CGAP, EST, Soares normalized, MGC, plasmid vector, directionally cloned, oligo-dT primed
BRACE3cerebellumnormaluncharacterized preparationuncharacterized treatmentnormal, cerebellum, uncharacterized preparation, EST, unknown developmental stage
BRAMY2cerebrumnormaluncharacterized preparationuncharacterized treatmentnormal, amygdala, uncharacterized preparation, EST, unknown developmental stage
BRAMY3cerebrumnormaluncharacterized preparationuncharacterized treatmentnormal, amygdala, uncharacterized preparation, EST, unknown developmental stage
BRHIP3cerebrumnormaluncharacterized preparationuncharacterized treatmentnormal, hippocampus, uncharacterized preparation, EST, unknown developmental stage
Subtracted Hippocampus, Stratagene (cat. #936205)cerebrumnormalbulksubtractednormal, hippocampus, bulk, subtracted, EST, unknown developmental stage, size fractionated, phage vector, oligo-dT primed
CT0031coloncancerbulkuncharacterized treatmentcolon, bulk, adult, ORESTES, EST, plasmid vector, colorectal cancer
CT0197coloncancerbulkuncharacterized treatmentcolon, bulk, adult, ORESTES, EST, plasmid vector, colorectal cancer
CT0283coloncancerbulkuncharacterized treatmentcolon, bulk, adult, ORESTES, EST, plasmid vector, colorectal cancer
CT0302coloncancerbulkuncharacterized treatmentcolon, bulk, adult, ORESTES, EST, plasmid vector, colorectal cancer
NCI_CGAP_Co16coloncancerbulksubtractedcolon, bulk, subtracted, CGAP, EST, Soares subtracted, unknown developmental stage, phagemid, colorectal cancer
NCI_CGAP_Co3coloncancerbulknormalizedcolon, bulk, normalized, CGAP, EST, Soares normalized, unknown developmental stage, phagemid, colorectal cancer
Embryo, 12 week IIembryonic tissuenormalbulknon-normalizednormal, non-normalized, bulk, EST, embryonic tissue, first trimester
NIH_MGC_262embryonic tissuenormalcell linenon-normalizednormal, non-normalized, cell line, EST, embryonic stem cell, MGC, embryonic tissue, male, unknown embryonic stage, plasmid vector, hESBGN-01
Soares_total_fetus_Nb2HF8_9wembryonic tissuenormalbulknormalizednormal, bulk, normalized, CGAP, EST, Soares normalized, embryonic tissue, first trimester, phagemid, oligo-dT primed
ADRGL2endocrinenormaluncharacterized preparationuncharacterized treatmentadrenal gland, normal, uncharacterized preparation, EST, unknown developmental stage
NCI_CGAP_Eso2esophaguscancerbulknon-normalizedesophagus, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, size fractionated, directionally cloned, phagemid, oligo-dT primed, squamous cell carcinoma of the esophagus
NIH_MGC_67eyecancercell linenon-normalizedeye, non-normalized, cell line, retinoblastoma, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed
UI-E-CK1eyenormalbulknormalizedeye, normal, bulk, adult, normalized, EST, plasmid vector, directionally cloned, oligo-dT primed
UI-E-DW1eyenormalbulkuncharacterized treatmentnormal, bulk, adult, lens, EST, plasmid vector, directionally cloned, oligo-dT primed
DT0045kidneyuncharacterized histologybulkuncharacterized treatmentkidney, bulk, adult, ORESTES, Denys-Drash syndrome, EST, plasmid vector
NCI_CGAP_Kid11kidneynormalbulkmultiple treatmentkidney, normal, bulk, normalized, subtracted, CGAP, EST, Soares subtracted, unknown developmental stage, phagemid
NCI_CGAP_Kid12kidneycancerbulksubtractedkidney, bulk, adult, subtracted, CGAP, EST, Soares subtracted, phagemid, oligo-dT primed, clear cell renal carcinoma
TKIDN2kidneycanceruncharacterized preparationuncharacterized treatmentkidney, uncharacterized preparation, EST, unknown developmental stage, kidney tumor
779 (synonym: hncc1)livernormalbulkuncharacterized treatmentfetus, liver, normal, bulk, EST
NCI_CGAP_Lu24lungcancerbulksubtractedlung, bulk, subtracted, CGAP, EST, Soares subtracted, unknown developmental stage, phagemid, oligo-dT primed, neuroendocrine lung carcinoid
NCI_CGAP_Lu28lungcancerbulknon-normalizedlung, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, size fractionated, directionally cloned, phagemid, oligo-dT primed, lung squamous cell carcinoma
NIH_MGC_101lungcancercell linenon-normalizedlung, non-normalized, cell line, EST, unknown developmental stage, MGC, Rubin non-normalized, plasmid vector, directionally cloned, oligo-dT primed, lung squamous cell carcinoma
Pediatric pre-B cell acute lymphoblastic leukemia Baylor-HGSC project=TCBAlymph nodecancerflow-sortednormalizedlymph node, acute lymphocytic leukemia, flow-sorted, normalized, juvenile, EST, male, directionally cloned, oligo-dT primed
Soares breast 3NbHBstmammary glandnormalbulknormalizedmammary gland, normal, bulk, adult, normalized, EST, Soares normalized, female, oligo-dT primed
TBAES2mammary glandcanceruncharacterized preparationuncharacterized treatmentmammary gland, uncharacterized preparation, adult, EST, female, breast (mammary gland) cancer
686 (synonym: hlcc3)musclenormalbulkuncharacterized treatmentskeletal muscle, normal, bulk, adult, EST
NIH_MGC_81musclenormalbulknon-normalizedskeletal muscle, normal, non-normalized, bulk, full-length enriched, EST, unknown developmental stage, MGC, Clontech non-normalized, size fractionated, plasmid vector
NCI_CGAP_Pan1pancreascancerbulknon-normalizedpancreas, non-normalized, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, size fractionated, phagemid, oligo-dT primed, pancreatic adenocarcinoma
HR85 isletpancreatic isletnormalbulkuncharacterized treatmentpancreatic islet, normal, bulk, EST, unknown developmental stage, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
Homo sapiens pancreatic isletpancreatic isletnormaluncharacterized preparationuncharacterized treatmentpancreatic islet, normal, uncharacterized preparation, EST, unknown developmental stage
Human insulinomapancreatic isletcancerbulkuncharacterized treatmentpancreatic islet, pancreas, bulk, EST, unknown developmental stage, phagemid, insulinoma
Soares_parathyroid_tumor_NbHPAparathyroidcancerbulknormalizedparathyroid, bulk, adult, normalized, CGAP, EST, Soares normalized, benign, phagemid, parathyroid tumor
Lupski_anterior_hornperipheral nervous systemnormalbulknon-normalizednerve, normal, non-normalized, bulk, EST, unknown developmental stage, MGC, size fractionated, directionally cloned, oligo-dT primed
GN0172placentanormalbulkuncharacterized treatmentnormal, placenta, bulk, adult, ORESTES, EST
Homo sapiens PLACENTA COT 25-NORMALIZEDplacentanormalbulknormalizednormal, placenta, bulk, pregnant, adult, normalized, EST, female, size fractionated, oligo-dT primed
NCI_CGAP_Pl6placentanormalbulksubtractednormal, placenta, bulk, pregnant, adult, subtracted, CGAP, EST, Soares subtracted, female, plasmid vector, directionally cloned, oligo-dT primed
NIH_MGC_79placentanormalbulknon-normalizednormal, non-normalized, placenta, bulk, adult, full-length enriched, EST, unknown developmental stage, MGC, Clontech non-normalized, female, size fractionated, plasmid vector
PLACE1placentanormalbulkuncharacterized treatmentnormal, placenta, bulk, pregnant, adult, EST, female
Soares placenta Nb2HPplacentanormalbulknormalizednormal, placenta, bulk, adult, normalized, EST, female, oligo-dT primed
Soares_placenta_8to9weeks_2NbHP8to9Wplacentanormalbulknon-normalizednormal, non-normalized, placenta, bulk, pregnant, adult, CGAP, EST, Soares non-normalized, female, phagemid, oligo-dT primed
NIH_MGC_122pooled tissuenormalbulknormalizedfetus, spleen, lung, normal, bulk, adult, normalized, full-length enriched, EST, LTI normalized, MGC, mixed pool by gender, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
NIH_MGC_186pooled tissuenormalbulknon-normalizedbrain, spinal cord, skin, vascular, normal, non-normalized, bulk, full-length enriched, EST, unknown developmental stage, mixed tissue, MGC, Clontech non-normalized, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
Soares_NFL_T_GBC_S1pooled tissuenormalbulksubtractedfetus, testis, lung, B-cell, normal, bulk, subtracted, CGAP, EST, Soares subtracted, mixed tissue, mixed developmental stages
Soares_NSF_F8_9W_OT_PA_P_S1pooled tissueuncharacterized histologybulksubtractedfetus, parathyroid, ovary, placenta, uncharacterized histology, bulk, adult, subtracted, CGAP, EST, Soares subtracted, mixed tissue, mixed developmental stages
Soares_NhHMPu_S1pooled tissuenormalbulksubtractedfetus, skin, uterus, heart, normal, melanocyte, bulk, subtracted, CGAP, EST, Soares subtracted, mixed tissue, mixed developmental stages, phagemid
Stratagene fetal retina 937202retinanormalbulknon-normalizedfetus, retina, normal, non-normalized, bulk, EST, mixed pool by gender, size fractionated, directionally cloned, phagemid, oligo-dT primed
NIH_MGC_49skincancercell linenon-normalizedskin, melanoma, non-normalized, cell line, EST, unknown developmental stage, MGC, Rubin non-normalized, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
NIH_MGC_62skincancercell linenon-normalizedskin, melanoma, non-normalized, cell line, EST, unknown developmental stage, MGC, Clontech non-normalized, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
NIH_MGC_72skincancercell linenon-normalizedskin, melanoma, non-normalized, cell line, EST, LTI non-normalized, unknown developmental stage, MGC, directionally cloned, phagemid, oligo-dT primed
Soares_senescent_fibroblasts_NbHSFskinnormalbulknormalizedskin, fibroblast, normal, bulk, normalized, CGAP, EST, Soares normalized, unknown developmental stage, phagemid, oligo-dT primed
NCI_CGAP_Gas4stomachcancerbulknon-normalizedstomach, poorly differentiated, non-normalized, bulk, adult, CGAP, EST, LTI non-normalized, size fractionated, directionally cloned, phagemid, oligo-dT primed, gastric signet-ring cell adenocarcinoma
434 (synonym: htes3)testisnormalbulkuncharacterized treatmenttestis, normal, bulk, adult, EST, male
NIH_MGC_180testisnormalbulknon-normalizedtestis, normal, non-normalized, bulk, EST, LTI non-normalized, unknown developmental stage, MGC, male, size fractionated, plasmid vector, directionally cloned, oligo-dT primed
NT2RP7testiscancercell lineuncharacterized treatmentmetastasis, testis, cell line, adult, retinoic acid, teratocarcinoma, EST, male, neural progenitor cell
RIKEN full-length enriched human cDNA library, testistestisuncharacterized histologyuncharacterized preparationuncharacterized treatmenttestis, uncharacterized histology, full-length enriched, EST, unknown developmental stage, male
Soares_testis_NHTtestisnormalbulknormalizedtestis, normal, bulk, normalized, CGAP, EST, Soares normalized, unknown developmental stage, male, oligo-dT primed
TESTI2testisnormaluncharacterized preparationuncharacterized treatmenttestis, normal, uncharacterized preparation, EST, unknown developmental stage, male
THYMU3thymusuncharacterized histologyuncharacterized preparationuncharacterized treatmentthymus, uncharacterized preparation, uncharacterized histology, EST, unknown developmental stage
313 (synonym: hlcc2)uncharacterized tissueuncharacterized histologybulkuncharacterized treatmentuncharacterized tissue, uncharacterized histology, bulk, adult, EST
Homo sapiens NEUROBLASTOMA COT 25-NORMALIZEDuncharacterized tissuecanceruncharacterized preparationnormalizedneuroblastoma, uncharacterized tissue, uncharacterized preparation, normalized, EST, unknown developmental stage, oligo-dT primed
Jurkat T-cells Vuncharacterized tissuecancercell linenon-normalizedblood, T-cell, acute lymphocytic leukemia, non-normalized, cell line, juvenile, EST, male
MAGE resequences, MAGGuncharacterized tissueuncharacterized histologyuncharacterized preparationuncharacterized treatmentuncharacterized tissue, uncharacterized preparation, uncharacterized histology, EST, unknown developmental stage
NCI_CGAP_Sub3uncharacterized tissueuncharacterized histologybulksubtracteduncharacterized tissue, uncharacterized histology, bulk, subtracted, CGAP, EST, Soares subtracted, mixed tissue, mixed developmental stages, phagemid
NIH_MGC_92uncharacterized tissuecancercell linenon-normalizednon-normalized, uncharacterized tissue, cell line, full-length enriched, embryonal carcinoma, EST, LTI non-normalized, unknown developmental stage, MGC, size fractionated, directionally cloned, phagemid, oligo-dT primed
TRACH3uncharacterized tissueuncharacterized histologyuncharacterized preparationuncharacterized treatmenttrachea, uncharacterized preparation, uncharacterized histology, EST, unknown developmental stage
NCI_CGAP_Ut1uteruscancerbulknon-normalizedwell differentiated, non-normalized, endometrium, bulk, CGAP, EST, LTI non-normalized, unknown developmental stage, female, size fractionated, directionally cloned, phagemid, oligo-dT primed, endometrial carcinoma
NIH_MGC_71uteruscancercell linenon-normalizeduterus, leiomyosarcoma, non-normalized, cell line, EST, LTI non-normalized, unknown developmental stage, MGC, female, size fractionated, directionally cloned, phagemid, oligo-dT primed
Soares_pregnant_uterus_NbHPUuterusnormalbulknormalizeduterus, normal, bulk, pregnant, adult, normalized, CGAP, EST, Soares normalized, female, phagemid, oligo-dT primed
UTERU3uterusuncharacterized histologyuncharacterized preparationuncharacterized treatmentuterus, uncharacterized preparation, uncharacterized histology, EST, unknown developmental stage, female