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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Library Info Page


Library ID

Library Name:MAPcL
Organism:Homo sapiens
UniGene Library ID:11244
Tissue Description:Pooled cell lines, ZR-75-1, MCF7, SK-BR-3, MDA-MB-231, hTERT-HME1, LNCaP
Library Keywords:brain, muscle, kidney, lung, liver, cell line, subtracted, mixed (normal and tumor), EST, mixed tissue, MGC, mixed developmental stages, size fractionated, directionally cloned, oligo-dT primed

Clones and Sequences

#Clones Generated to Date:4992
#Sequences Generated to Date:4249

Library Preparation Details

Description:Subtracted with brain, liver, lung, kidney and muscle. Directionally cloned. Priming method: oligo-dT. Average insert size: 1800 bp. Library amplification: 26,000 fold. Kristi A. Egland, James J. Vincent, Robert Strausberg, Bungkook Lee & Ira Pastan: Discovery of new breast cancer genes encoding membrane and secreted proteins. Manuscript submitted.
R. Site1:EcoRV
R. Site2:Not I
Lab Host:EMDH10B
Vector:pCMV-SPORT6
Vector Type:
Tissue Supplier:Kristi A. Egland, Ira Pastan
Library Producer:Invitrogen Corp