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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Library Info Page


Library ID

Library Name:NIH_MGC_95
Organism:Homo sapiens
UniGene Library ID:8569
Tissue Description:Brain, hippocampus
Library Keywords:normal, hippocampus, bulk, normalized, full-length enriched, EST, unknown developmental stage, MGC, size fractionated, phagemid, oligo-dT primed

Clones and Sequences

#Clones Generated to Date:30735
#Sequences Generated to Date:17576

Library Preparation Details

Description:Oligo-dT primed using primer 5'-TTTTTTTTTTTTTTTTVN-3', size-selected for average insert size 2.5 kb and normalized to ROT 5. This is a primary library enriched for full-length clones and constructed using the Cap-trapper method (Carninci, in preparation). Library constructed by M. Brownstein (NIMH/NHGRI, National Institutes of Health). Note: this is a NIH_MGC Library.
R. Site1:BamHI
R. Site2:SalI-XhoI (gtcgag)
Lab Host:DH10B
Vector:pBluescriptR (modified pBluescript KS+)
Vector Type:phagemid (ampicillin resistant)
Tissue Supplier:
Library Producer:Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN)