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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Library Info Page


Library ID

Library Name:NCI_CGAP_HN21
Organism:Homo sapiens
UniGene Library ID:8611
Tissue Description:Head and neck, nasopharyngeal carcinoma-malignant cells
Library Keywords:nasopharynx, non-normalized, bulk, CGAP, EST, unknown developmental stage, Krizman protocol 3, size fractionated, plasmid vector, directionally cloned, oligo-dT primed, nasopharyngeal carcinoma

Clones and Sequences

#Clones Generated to Date:2688
#Sequences Generated to Date:1596

Library Preparation Details

Description:mRNA made from head/neck tumor, cDNA made by oligo-dT priming. Directionally cloned into UDG sites. Size-selected on agarose gel, average insert size 300 bp. Primary library. cDNA Library Preparation: David B. Krizman, Ph.D.
R. Site1:
R. Site2:
Lab Host:DH10B
Vector:pAMP1
Vector Type:plasmid (ampicillin resistant)
Tissue Supplier:Scott Diehl
Library Producer:Vlado Knezevic, Jennifer Worth