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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Library Info Page


Library ID

Library Name:NCI_CGAP_Lym6
Organism:Homo sapiens
UniGene Library ID:1453
Tissue Description:Lymph node, mantle cell lymphoma, node 3
Library Keywords:lymph node, mantle cell lymphoma, non-normalized, bulk, CGAP, EST, Stratagene non-normalized, unknown developmental stage, size fractionated, directionally cloned, phagemid, oligo-dT primed

Clones and Sequences

#Clones Generated to Date:2688
#Sequences Generated to Date:621

Library Preparation Details

Description:Cloned unidirectionally. Primer: Oligo dT. Average insert size 0.8 kb. Non-amplified library. ~5' adaptor sequence: 5' GAATTCGGCACGAG 3' ~3' adaptor sequence: 5' CTCGAGTTTTTTTTTTTTTTTTTT 3'
R. Site1:EcoRI
R. Site2:XhoI
Lab Host:SOLR (Stratagene, kanamycin resistant)
Vector:pBluescript SK-
Vector Type:phagemid (ampicillin resistant)
Tissue Supplier:Mark Raffeld, M.D.
Library Producer:Stratagene, Inc.