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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Breast_metastatic_carcinoma_B_LN2
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:metastasis, mammary gland, carcinoma, non-normalized, short sage, bulk

Tag Info

#Total tags:60,384
#Tags excluding linkers:60,343
#Unique tags:20,057

Tissue Info

Tissue:breast
Cell/Histology type:carcinoma
Tissue preparation:bulk
Mutations:null
Patient age:52.8
Sex:female
Other info:Metastatic tumor (lymph node metastasis from breast primary tumor). Age at discovery of primary tumor: 52.8 years, 16 postive lymph nodes. Primary tumor is 3.2 cm, histo grade = 3, nuclear grade = 3, ER+, PR+.

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:Jeffrey Marks, Duke University Medical Center
Library preparer:Kornelia Polyak
Prepared in lab of:Kornelia Polyak, Dana-Farber Cancer Institute
References:D. A. Porter et al., Cancer Res 61, 5697-702 (2001)