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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Breast_carcinoma_CL_MCF7control_0h
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:mammary gland, carcinoma, cell line, non-normalized, short SAGE, SAGE

Tag Info

#Total tags:60,429
#Tags excluding linkers:59,877
#Unique tags:15,401

Tissue Info

Tissue:breast
Cell/Histology type:carcinoma
Tissue preparation:cell line
Mutations:null
Patient age:null
Sex:female
Other info:Estrogen receptor positive MCF7 cells were grown in conditions devoid of estrogen for 48h (i.e. IMEM media supplemented with 10% Charcoal Stripped Serum). This SAGE library represents the 0h time point (i.e. baseline, untreated cells) of an estrogen exposure time course experiment.

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:American Tissue Type Collection
Library preparer:null
Prepared in lab of:Marcelo Aldaz, M.D. Anderson Cancer Center
References: