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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:mSAGE_Mammary_gland_normal_p53_null_organoid_B_14
Old SAGE Library Name:
Organism:Mus musculus
Library Keywords:mammary gland, normal, organoid, epithelium, bulk, female, adult, short sage, balb/c, p53 null

Tag Info

#Total tags:58,734
#Tags excluding linkers:58,675
#Unique tags:22,292

Tissue Info

Tissue:mammary gland
Cell/Histology type:Normal mouse mammary epithelium
Tissue preparation:bulk
Mutations:p53 null
Patient age:15 weeks
Sex:female
Other info:Balb/c mammary epithelium from transplants grown into cleared fat pads of syngeneic hosts. Genotype = P53 null mammary gland transplants, that received no treatment, harvested 7 wks post-transplatation. Ref. Oncogene (2002) 21, 6366-6376

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:Daniel Medina, Baylor College of Medicine
Library preparer:C. Marcelo Aldaz
Prepared in lab of:C. Marcelo Aldaz, M.D. Anderson Cancer Center
References:C. M. Aldaz et al., Oncogene 21, 6366-76 (2002)