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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Prostate_carcinoma_B_pool2
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:prostate, carcinoma, bulk, non-normalized, short SAGE

Tag Info

#Total tags:70,319
#Tags excluding linkers:66,034
#Unique tags:22,306

Tissue Info

Cell/Histology type:carcinoma, prostate glands and stroma
Tissue preparation:bulk
Patient age:null
Other info:Tissues were pooled from 4 patients. The samples contained 80-90% malignant glands (Gleason score 3 and 4) and 10-20% stroma with no normal glands. None of the patients had any hormonal, radiation or chemotherapy for prostate cancer prior to surgery.

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:LNCaP cells from ATCC
Library preparer:null
Prepared in lab of:YQ Chen, Wayne State University
References:A. Waghray et al., Proteomics 1, 1327-38 (2001)