Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Prostate_carcinoma_B_pool2
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:prostate, carcinoma, bulk, non-normalized, short SAGE

Tag Info

#Total tags:70,319
#Tags excluding linkers:66,034
#Unique tags:22,306

Tissue Info

Tissue:prostate
Cell/Histology type:carcinoma, prostate glands and stroma
Tissue preparation:bulk
Mutations:null
Patient age:null
Sex:male
Other info:Tissues were pooled from 4 patients. The samples contained 80-90% malignant glands (Gleason score 3 and 4) and 10-20% stroma with no normal glands. None of the patients had any hormonal, radiation or chemotherapy for prostate cancer prior to surgery.

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:LNCaP cells from ATCC
Library preparer:null
Prepared in lab of:YQ Chen, Wayne State University
References:A. Waghray et al., Proteomics 1, 1327-38 (2001)