Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-2
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:mammary gland, epithelium, ductal, in situ, carcinoma, antibody purified, non-normalized, short sage

Tag Info

#Total tags:66,349
#Tags excluding linkers:66,168
#Unique tags:20,611

Tissue Info

Tissue:breast
Cell/Histology type:carcinoma
Tissue preparation:antibody purified
Mutations:null
Patient age:null
Sex:unknown
Other info:Breast, DCIS, BerEp4 purified cells. Library name in Cancer Cell, 2004, 6(1):17-32 "D-EPI-2 epithelial cells"

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:Dennis Sgroi, M.D.
Library preparer:Kornelia Polyak, M.D., Ph.D.
Prepared in lab of:Polyak lab, Dana-Farber Cancer Institute
References:D. A. Porter et al., Cancer Res 61, 5697-702 (2001)
I. E. Krop et al., Proc Natl Acad Sci U S A 98, 9796-9801 (2001)