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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Breast_carcinoma_MD_DCIS
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:mammary gland, epithelium, ductal, in situ, carcinoma, microscope dissected, non-normalized, short SAGE

Tag Info

#Total tags:42,174
#Tags excluding linkers:40,783
#Unique tags:14,237

Tissue Info

Tissue:breast
Cell/Histology type:ductal carcinoma in situ
Tissue preparation:microscope dissected
Mutations:null
Patient age:67
Sex:female
Other info:Breast, macroscopically dissected (>90% pure) high grade, comedo DCIS (ductal carcinoma in situ) of the breast obtained from a 67 year old female patient undergoing partial mastectomy. The tumor cells are estrogen and progesteron receptor positive

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:null
Library preparer:null
Prepared in lab of:Kornelia Polyak, Dana-Farber Cancer Institute
References:I. E. Krop et al., Proc Natl Acad Sci U S A 98, 9796-9801 (2001)
D. A. Porter et al., Cancer Res 61, 5697-702 (2001)